Return to main results Retrieve Phyre Job Id

Job DescriptionP45577
Confidence67.78%DateThu Jan 5 12:03:23 GMT 2012
Rank10Aligned Residues60
% Identity13%Templatec2qqsB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:jmjc domain-containing histone demethylation PDBTitle: jmjd2a tandem tudor domains in complex with a trimethylated2 histone h4-k20 peptide
Resolution2.82 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   171........180.........190.........200. ........210... ......220.........230
Predicted Secondary structure 


















.



.



Query SS confidence 






























.











.
















Query Sequence  APREEQHTPVSDISALTVGQALKVKAGQNAM. DATVLEITKDGV. RVQLNSGMSLIVRAEHL
Query Conservation                 
  
  
 
  
    . 
 
 

 
  
. 
 
 

    
 
  
Alig confidence 






























.











.
















Template Conservation    
 
   
    
   

  
     

  
 
 
        
 
 



    
 
  
Template Sequence  YPEDIVSQDCLQFGPPAEGEVVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDV
Template Known Secondary structure 
GGGB
SS




TT

TTS

SS

GGG
Template Predicted Secondary structure 

























Template SS confidence 





























































   942.......950.........960.........970.........980.........990.........1000...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions