Return to main results Retrieve Phyre Job Id

Job DescriptionP45577
Confidence58.90%DateThu Jan 5 12:03:23 GMT 2012
Rank16Aligned Residues63
% Identity14%Templatec2kfwA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase PDBTitle: solution structure of full-length slyd from e.coli
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   160.........170.........180. ........190.........200.........210.........220..
Predicted Secondary structure 




















.
















Query SS confidence 





















.








































Query Sequence  KPVEKAPKTVKAPREEQHTPVS. DISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLNSGMS
Query Conservation   
                    .    
  
  
 
  
     
 
 

 
  
 
 
 

  
Alig confidence 





















.








































Template Conservation   
  



 
  

  

   
     
  
  
      
     
  
    
 

 




Template Sequence  GANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLA
Template Known Secondary structure  STTTTSS


TTT

GGG


SS


TT
TTB



SSS



TTS
Template Predicted Secondary structure 































Template SS confidence 































































   63......70.........80.........90.........100.........110.........120......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions