Return to main results Retrieve Phyre Job Id

Job DescriptionP45577
Confidence14.94%DateThu Jan 5 12:03:23 GMT 2012
Rank77Aligned Residues30
% Identity23%Templatec1i84V_
PDB info PDB header:contractile proteinChain: V: PDB Molecule:smooth muscle myosin heavy chain; PDBTitle: cryo-em structure of the heavy meromyosin subfragment of2 chicken gizzard smooth muscle myosin with regulatory light3 chain in the dephosphorylated state. only c alphas4 provided for regulatory light chain. only backbone atoms5 provided for s2 fragment.
Resolution20.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   201........210........ .220.........230
Predicted Secondary structure 





.


Query SS confidence 

















.











Query Sequence  MDATVLEITKDGVRVQLN. SGMSLIVRAEHL
Query Conservation    
 
 

 
  
 
 
 .

    
 
  
Alig confidence 

















.











Template Conservation      
       
 
     
    
     
Template Sequence  EAASIKEEKGDEVTVELQENGKKVTLSKDDI
Template Known Secondary structure  TTTTT

TTS
Template Predicted Secondary structure 








Template SS confidence 






























   45....50.........60.........70.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions