Job Description P39349 Confidence 100.00% Date Thu Jan 5 11:59:38 GMT 2012 Rank 5 Aligned Residues 276 % Identity 15% Template c3lxqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp1736; PDBTitle: the crystal structure of a protein in the alkaline2 phosphatase superfamily from vibrio parahaemolyticus to3 1.95a Resolution 1.95 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																													.	.																																	.	.	.
Query SS confidence																																													.	.																																	.	.	.
Query Sequence		T	G	K	S	S	R	X	A	P	L	Y	D	T	I	V	I	V	T	G	E	S	V	R	R	D	Y	M	S	V	Y	D	Y	P	V	P	T	T	P	W	L	N	T	A	.	.	P	G	L	F	I	D	D	Y	T	S	T	A	S	S	T	V	S	S	L	S	R	T	L	I	Y	D	Y	E	Q	N	P	D	.	.	.
Query Conservation																																													.	.																																	.	.	.
Alig confidence																																					.								.	.																																	.	.	.
Template Conservation																																					.
Template Sequence		N	S	N	P	A	T	Y	Q	G	K	R	K	N	L	V	I	L	L	Q	E	S	L	G	A	Q	F	V	G	S	L	G	G	L	P	L	.	T	P	N	L	D	E	L	X	Q	E	G	W	Q	F	T	Q	X	Y	A	T	G	T	R	S	V	R	G	I	E	A	V	T	T	G	F	P	P	S	P	S	R	A	V	V
Template Known Secondary structure							S			S	S										T	T			G	G	G		G	G	G	T	S		S		.									T	T	S				T	T				S		S	S																S	S			T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
									156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																						.																			.	.
Query SS confidence		.	.	.	.	.	.	.																						.																			.	.
Query Sequence		.	.	.	.	.	.	.	S	G	N	N	V	V	A	L	A	A	K	A	G	Y	S	T	W	W	I	S	N	.	Q	G	K	L	G	E	H	D	T	R	I	S	V	I	A	S	D	A	.	.	E	H	A	T	F	L	K	K	G	S	F	A	S	R	K	T	D	D	K	L	L	L	Q	E	T	E	R	A	L	A	D
Query Conservation		.	.	.	.	.	.	.																						.																			.	.
Alig confidence		.	.	.	.	.	.	.																						.																			.	.
Template Conservation
Template Sequence		K	L	S	K	S	Q	T	G	F	F	T	I	A	D	L	L	K	E	Q	G	Y	H	T	Q	F	I	Y	G	G	E	A	N	F	D	N	X	K	T	F	F	F	G	N	G	F	D	Q	I	V	E	E	K	N	Y	T	N	P	G	F	V	G	S	W	G	V	S	D	E	D	L	Y	N	K	A	D	E	E	F	E	R
Template Known Secondary structure		T		G	G	G	S	S	S	B										T	T								S	S		T	T	G	G	G								T	T							G	G	G		S	S		S				T	T
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
					226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure		.	.	.																																																															.	.
Query SS confidence		.	.	.																																																															.	.
Query Sequence		.	.	.	T	S	S	P	K	I	I	F	L	H	M	M	G	S	H	P	N	P	C	D	S	L	N	S	X	P	N	N	Y	L	E	Q	Y	P	R	K	I	A	C	Y	L	A	S	I	S	K	L	D	N	F	L	G	Q	L	D	G	I	L	R	R	Y	S	.	.	R	H	F	A	M	L	Y	F	S	G	L	G	L
Query Conservation		.	.	.																																																															.	.
Alig confidence		.	.	.																						.	.	.	.	.																																					.	.
Template Conservation																										.	.	.	.	.
Template Sequence		L	S	K	G	D	K	P	F	F	S	L	V	F	T	S	S	N	H	S	P	Y	E	Y	P	.	.	.	.	.	E	G	K	I	E	Q	Y	D	S	E	H	X	T	R	N	N	A	V	K	Y	S	D	Y	A	L	G	T	F	F	D	K	A	K	K	S	S	Y	W	D	D	T	I	F	I	V	I	A	D	H	D	A
Template Known Secondary structure				T	S	S	S										S	S	S	T	T					.	.	.	.	.	T	T	S	S			S	S	S	S	S	S																					T	T	S	S	S	G	G	G								S			S
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.						.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	S	D	S	A	N	P	V	H	H	Y	G	H	V	Q	G	G	Y	S	V	P	L	I	I	T	A	S	D	I	T	S	H	Q	P	V	S	R	K	I	S	A	R	H	F	A	G	I	F	Q	W	M	T	G	I	C	T	E	N	I	P	P	F	N	P	L	T	D	E
Query Conservation
Alig confidence								.	.	.	.	.	.																			.
Template Conservation								.	.	.	.	.	.																			.
Template Sequence		R	V	F	G	A	N	.	.	.	.	.	.	L	V	P	V	K	H	F	H	I	P	A	L	I	I	G	K	D	I	.	Q	P	R	K	D	D	R	I	A	N	N	I	D	X	P	P	T	L	L	S	L	I	G	V	D	A	K	T	P	X	I	G	R	D	L	T	K	P
Template Known Secondary structure					S		S	.	.	.	.	.	.	S			G	G	G	T								S	T	T		.											G	G	G										T									S			T	T	S
Template Predicted Secondary structure								.	.	.	.	.	.																			.
Template SS confidence
		508	.	510	.	.	.							.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.		.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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