Job Description P39349 Confidence 98.73% Date Thu Jan 5 11:59:38 GMT 2012 Rank 34 Aligned Residues 207 % Identity 15% Template c3e2dB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: the 1.4 a crystal structure of the large and cold-active2 vibrio sp. alkaline phosphatase Resolution 1.40 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query Sequence		L	Y	D	T	I	V	I	V	T	G	E	S	V	R	R	D	Y	M	S	V	Y	.	.	.	.	.	.	.	.	.	D	Y	P	V	P	T	T	P	W	L	N	T	A	P	G	L	F	I	D	D	Y	T	S	T	A	S	S	.	.	.	.	.	.	T	V	S	S	L	S	R	T	L	I	Y	D	Y	E	Q	N	P
Query Conservation																							.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	K	N	V	I	L	M	I	G	D	G	M	G	P	Q	Q	V	G	L	L	E	T	Y	A	N	Q	A	P	N	S	I	Y	K	G	N	K	T	A	I	Y	Q	L	A	Q	E	G	V	I	G	S	S	L	T	H	P	E	D	A	I	V	V	D	S	A	C	S	A	T	M	L	A	T	G	I	Y	S	S	S	E
Template Known Secondary structure																														T	T		T	T	T	T												S										T	T	S	S	S													S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
										155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																											.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	D	S	G	N	N	V	V	A	L	A	A	K	A	G	Y	S	T	W	W	I	S	N	Q	G	K	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	D	T	R	I	S	V	I	A	S	D	A	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	G	I	D	S	Q	G	N	H	V	E	T	V	L	E	K	A	K	K	A	G	K	A	T	G	L	V	S	D	T	R	L	T	H	A	T	P	A	S	F	A	A	H	Q	P	H	R	S	L	E	N	Q	I	A	S	D	M	L	A	T	G	A	D	V	M	L	S	G	G	L	R	H	W	I	P	K	S	T	N
Template Known Secondary structure			B	S	B		T	T	S		B											T	T											T	T	S					T	T	T			B	S		T	T													T		S							G	G	G	S	S		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
																																																																				195	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	A	T	F	L	K	K	G	S	F	A	S	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	G	E	T	Y	K	Q	L	E	K	L	T	Q	G	D	V	Y	L	K	S	K	R	K	D	D	R	N	L	L	T	E	A	E	K	D	G	Y	Q	L	A	F	N	R	N	M	L	D	D	A	K	G	D	K	L	L	G	L	F	A	Y	S	G	M	D	D	G	I	A	Y	S	N	K	K	K	S	G	E	R	T
Template Known Secondary structure		G	T	S										T	T	T		S							S	S											T	T					S	S									S	S							S	S	S	S														T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	D	D	K	L	L	L	Q	E	T	E	R	A	L	A	D	T	S	S	P	K	I	I	F	L	H	M	M	G	S	H	P	N	P	C	D	S	L	N	S	X	P	N	N	Y	L	E	Q	Y	P	R	K	I	A	C	Y	L	A	S	I	S	K	L	D	N	F	L	G	Q	L	D	G	I	L	R	R	Y	S	R
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		Q	P	S	L	K	E	M	T	Q	K	A	L	N	I	L	S	K	D	E	D	G	F	F	L	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	G	Q	I	D	W	A	G	H	S	N	D	A	G	T	M	L	H	E	L	L	K	F	D	E	A	I	Q	T	V	Y	E	W	A	K	D	R	E	.
Template Known Secondary structure		S															T	T		T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.				S							T	T																								T	T		S	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.															.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		H	F	A	M	L	Y	F	S	G	L	.	.	.	G	L	S	V	S	D	S	A	N	P	V	H	H
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		D	T	I	V	I	V	T	A	D	H	E	T	G	S	F	G	F	S	Y	S	S	N	D	L	P	K
Template Known Secondary structure		S												S							B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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