Job Description P39349 Confidence 100.00% Date Thu Jan 5 11:59:38 GMT 2012 Rank 1 Aligned Residues 309 % Identity 12% Template c2w8dB_ PDB info PDB header:transferase Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2; PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis Resolution 2.35 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.		.	.
Predicted Secondary structure																																																																.	.	.	.												.
Query SS confidence																																																																.	.	.	.												.
Query Sequence		T	D	T	L	R	E	M	Q	R	Y	E	Q	L	S	S	T	G	L	T	T	G	K	S	S	R	X	A	P	L	Y	D	T	I	V	I	V	T	G	E	S	V	R	R	D	Y	M	S	V	Y	D	Y	P	V	P	T	T	P	W	L	N	T	A	.	.	.	.	P	G	L	F	I	D	D	Y	T	S	T	.	A	S
Query Conservation																																																																.	.	.	.												.
Alig confidence																																																																.	.	.	.												.
Template Conservation
Template Sequence		A	D	S	S	D	V	T	E	V	E	N	Y	X	K	A	N	Y	D	V	P	N	N	V	Y	F	G	K	A	E	G	K	N	V	I	Y	V	S	L	E	S	L	Q	S	F	I	I	D	Y	K	I	D	G	K	E	V	T	P	F	L	N	K	L	A	H	D	N	E	T	F	Y	F	D	N	F	F	H	Q	T	G	Q
Template Known Secondary structure				G	G	G											T						T	T	T	T	T	T	T	T	T									T	T			G	G	G	T	T				T	T			S	S									S	S	S	S				S	S							T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.										.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																										.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.																										.	.	.	.
Query Sequence		S	T	V	S	S	L	S	R	T	L	I	Y	D	Y	E	Q	N	P	D	.	.	.	.	.	.	.	.	.	S	G	N	N	V	V	A	L	A	A	K	A	G	Y	S	T	W	W	I	S	N	Q	G	K	L	.	.	.	.	G	E	H	D	T	R	I	S	V	I	A	S	D	A	E	H	A	T	F	L	K	K	G
Query Conservation																					.	.	.	.	.	.	.	.	.																										.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation
Template Sequence		G	K	S	D	A	E	F	X	X	E	N	S	L	Y	P	L	A	Q	G	S	V	F	V	N	K	A	Q	N	T	L	Q	S	V	P	A	I	L	K	S	K	N	Y	T	S	A	T	F	H	G	N	T	Q	T	F	W	N	R	N	E	X	Y	K	A	E	G	I	D	K	F	F	D	S	A	Y	Y	D	X	N	E	E
Template Known Secondary structure		T																S	S	S							T	T	S									G	G	G	G	T								S	S		T	T	G	G	G									T							G	G	G	S				T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	A	S	R	K	T	D	D	K	L	L	L	Q	E	T	E	R	A	L	A	D	T	S	S	P	K	I	I	F	L	H	M	M	G	S	H	P	N	P	C	D	S	L	N	S	X	P	N	N	Y	L	E	Q	Y	P	R	K	I	A	C	Y	L	A	S	I	S	K	L	D	N	F	L	G	Q	L	D	G	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	K	N	Y	G	X	K	D	K	P	F	F	K	E	S	X	P	L	L	E	S	L	P	Q	P	F	Y	T	K	F	I	T	L	S	N	H	F	P	F	G	X	D	E	G	D	T	D	F	P	A	G	D	F	G	D	S	V	V	D	N	Y	F	Q	S	A	H	Y	L	D	Q	S	I	E	Q	F	F	N	D	L
Template Known Secondary structure		T	B		S	S	S	B															T	S		S	S									S	S		T	T					B	T	T	B							S	S
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		284	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.									.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure						.	.																			.	.	.	.	.	.	.	.
Query SS confidence						.	.																			.	.	.	.	.	.	.	.
Query Sequence		R	R	Y	S	.	.	R	H	F	A	M	L	Y	F	S	G	L	G	L	S	V	S	D	S	.	.	.	.	.	.	.	.	A	N	P	V	H	H	Y	G	H	V	Q	G	G	Y	S	V	P	L	I	I	T	A	S	D	I	T	S	H	Q	P	V	S	R	K	I	S	A	R	H	F	A	G	I	F	Q	W	M	T
Query Conservation						.	.																			.	.	.	.	.	.	.	.
Alig confidence						.	.																			.	.	.	.	.	.	.	.																									.
Template Conservation																																																										.
Template Sequence		K	K	D	G	L	Y	D	K	S	I	I	V	X	Y	G	D	H	Y	G	I	S	E	N	H	N	K	A	X	A	K	V	L	G	K	D	E	I	T	D	Y	D	N	A	Q	L	Q	R	V	P	L	F	I	H	A	A	G	.	V	K	G	E	K	V	H	K	Y	A	G	D	V	D	V	A	P	T	I	L	H	L	L
Template Known Secondary structure				T	S		G	G	G									S		S	S		G	G	G								T	T	S	S										T	T	B								T	T	.	S							S				G	G	G									T
Template Predicted Secondary structure																																																										.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.		.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
		354	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		G	I	C	T	E	N	I	P	P	.	F	N	P	L	T	D	E	D	N
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		G	V	D	T	K	D	Y	L	X	S	G	S	D	I	L	S	K	E	H
Template Known Secondary structure		T				T	T	S							T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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