Return to main results Retrieve Phyre Job Id

Job DescriptionP39349
Confidence5.65%DateThu Jan 5 11:59:38 GMT 2012
Rank75Aligned Residues32
% Identity16%Templatec2hbzA_
PDB info PDB header:hydrolase/hydrolase inhibitorChain: A: PDB Molecule:caspase-1; PDBTitle: crystal structure of human caspase-1 (arg286->ala, glu390->ala) in2 complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-3 propionylamino]-4-oxo-pentanoic acid (z-vad-fmk)
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   270.........280.........290.........300.
Predicted Secondary structure 









Query SS confidence 































Query Sequence  SKLDNFLGQLDGILRRYSRHFAMLYFSGLGLS
Query Conservation     
  
  

  
      



  



  
Alig confidence 































Template Conservation   

   
  
            

 
 


  
Template Sequence  SDMTTELEAFAHRPEHKTSDSTFLVFMSHGIR
Template Known Secondary structure  T
GGGGG
S
S
T
Template Predicted Secondary structure 











Template SS confidence 































   209210.........220.........230.........240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions