Return to main results Retrieve Phyre Job Id

Job DescriptionP37614
Confidence1.97%DateThu Jan 5 11:55:50 GMT 2012
Rank84Aligned Residues8
% Identity75%Templatec1envA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:hiv-1 envelope protein chimera consisting of a fragment of PDBTitle: atomic structure of the ectodomain from hiv-1 gp41
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.....
Predicted Secondary structure 
Query SS confidence 







Query Sequence  LLMLCVWG
Query Conservation 



 


Alig confidence 







Template Conservation 

 




Template Sequence  LLQLTVWG
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   54.....60.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions