Job Description P69922 Confidence 61.23% Date Thu Jan 5 12:12:22 GMT 2012 Rank 24 Aligned Residues 181 % Identity 15% Template d2bfda1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 1.39

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																															.	.								.	.													.	.	.	.	.	.	.	.
Query SS confidence																															.	.								.	.													.	.	.	.	.	.	.	.
Query Sequence		A	E	A	A	A	C	E	E	K	F	S	S	Q	N	V	G	L	T	I	T	V	T	P	C	W	C	Y	G	S	.	.	E	T	I	D	M	D	P	.	.	T	R	P	K	A	I	W	G	F	N	G	T	.	.	.	.	.	.	.	.	E	R	P	G	A	V	Y	L	A	A	A	L	A	A	H	S	Q	K	G	I
Query Conservation																															.	.								.	.													.	.	.	.	.	.	.	.
Alig confidence																															.	.								.	.													.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		V	G	A	A	Y	A	A	K	R	A	N	A	N	R	V	V	I	C	Y	F	G	E	G	A	A	S	E	G	D	A	H	A	G	F	N	F	A	A	T	L	E	C	P	I	I	F	F	C	R	N	N	G	Y	A	I	S	T	P	T	S	E	Q	Y	R	G	D	G	I	A	A	R	G	P	G	Y	.	.	.	G	I
Template Known Secondary structure												T											T	T	G	G	G	S													T	T											S			T	T			G	G	G	T		S	S	S	T	T	G	G	G	T	G	G	G	.	.	.	T
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	F	S	I	Y	G	H	D	V	Q	D	A	D	D	T	S	I	P	A	D	V	E	E	K	L	L	R	F	A	R	A	G	L	A	V	A	S	M	K	G	K	S	Y	L	S	L	G	G	V	S	M	G	I	A	G	S	I	V	D	H	N	F	F	E	S	W	L	G	M	K	V	Q	A	V	D	M	T	E	L
Query Conservation
Alig confidence																	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Sequence		M	S	I	R	V	D	G	N	D	V	F	A	V	Y	N	.	.	.	.	.	.	A	T	K	E	A	R	R	R	A	V	A	E	N	Q	P	F	L	I	E	A	M	T	Y	R	I	G	S	T	D	.	.	.	.	.	.	.	.	.	H	P	I	S	R	L	R	H	Y	L	L	S	Q	G	W	W	D	E	E	Q	E
Template Known Secondary structure								T	T								.	.	.	.	.	.													T																	.	.	.	.	.	.	.	.	.											T	T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.							.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.										.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		R	R	R	I	D	Q	K	I	Y	D	E	A	E	L	E	M	A	L	A	W	A	D	K	N	.	.	.	.	F	R	Y	G	E	D	E	N	N	K	Q	Y	Q	R	N	A	E	Q	S	R	A	V	L	R	E	S	L	L	M	A
Query Conservation																										.	.	.	.
Alig confidence								.		.	.															.	.	.	.
Template Conservation								.		.	.
Template Sequence		K	A	W	R	K	Q	.	S	.	.	R	R	K	V	M	E	A	F	E	Q	A	E	R	K	P	K	P	N	P	N	L	L	F	S	D	V	Y	Q	E	M	P	A	Q	L	R	K	Q	Q	E	S	L	A	R	H	L	Q	T	Y
Template Known Secondary structure								.		.	.														S		B			G	G	G	G	S	T	T	S	S	S	S
Template Predicted Secondary structure								.		.	.
Template SS confidence
		335	.	.	.	.	340		.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions