Job Description P69922 Confidence 36.47% Date Thu Jan 5 12:12:22 GMT 2012 Rank 63 Aligned Residues 98 % Identity 18% Template c3td9A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:branched chain amino acid abc transporter, periplasmic PDBTitle: crystal structure of a leucine binding protein livk (tm1135) from2 thermotoga maritima msb8 at 1.90 a resolution Resolution 1.90 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		K	I	G	I	R	P	V	I	D	G	R	R	M	G	V	R	E	S	L	E	E	Q	T	M	N	M	A	K	A	T	A	A	L	L	T	E	K	L	R	H	A	C	G	A	A	V	E	C	V	I	S	D	T	C	I	A	G	M	A	E	A	A	A	C	E	E	K	F	.	S	S	Q	N	V	G	L	T	I	T	V
Query Conservation																																																																						.
Alig confidence													.	.	.	.	.	.	.																					.																.														.
Template Conservation													.	.	.	.	.	.	.																					.																.
Template Sequence		K	I	A	V	I	L	P	X	T	G	G	.	.	.	.	.	.	.	I	S	A	F	G	R	X	V	W	E	G	I	Q	I	A	H	E	E	K	P	.	T	V	L	G	E	E	V	E	L	V	L	L	D	T	R	.	S	E	K	T	E	A	A	N	A	A	A	R	A	I	D	K	E	K	V	L	A	I	I	G	E
Template Known Secondary structure										S	S	T	.	.	.	.	.	.	.	T																				.			T	T											T	.	T															T	S			S
Template Predicted Secondary structure													.	.	.	.	.	.	.																					.																.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	C	W	C	Y	G	S	E	T	I	D	M	D	P	T	R	P	K	A	I	W	G	F	N	G	T	E	R
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		V	A	S	A	H	.	S	L	A	I	A	P	I	A	E	E	N	K	V	P	X	V	T	P	A	S	T	N	P
Template Known Secondary structure		S	S				.											T	T						S	S				G
Template Predicted Secondary structure							.
Template SS confidence
		93	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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