 |
Job Description | P69922 | Confidence | 28.62% | Date | Thu Jan 5 12:12:22 GMT 2012 |
Rank | 91 | Aligned Residues | 63 |
% Identity | 13% | Template | c3o3nA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:alpha-subunit 2-hydroxyisocaproyl-coa dehydratase; |
PDBTitle: (r)-2-hydroxyisocaproyl-coa dehydratase in complex with its substrate2 (r)-2-hydroxyisocaproyl-coa
|
Resolution | 2.30 Å |
|
 |
  |   |
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | N | F | F | E | S | W | L | G | M | K | V | Q | A | V | D | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | E | L | R | R | R | I | D | Q | K | I | Y | D | E | A | E | L | E | M | A | L | A | W | A | D | K | N | F | R | Y | G | E | D | E | N | N | K | Q | Y | Q | R | N | A | E | Q | S | R | A | V | L | R | E | S | L |
Query Conservation |   |
  |   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|
| . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|
|   |   |   |
|
|
|
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . |
|
|   |   |
|
|   |   |
|
|   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|   |
|   |   |   |
|
Template Sequence |   |
Y | E | N | I | S | R | E | L | D | I | P | L | I | M | I | D | T | T | F | N | N | E | D | E | V | T | Q | S | R | I | D | Y | I | K | A | . |
. |
. |
. |
. |
. |
Q | F | E | E | A | I | K | Q | L | E | I | I | S | G | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | F | D | P | K | K | F | E | E | V | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
|
|
| B |
| S | S | S |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 180 | . | . | . | . |
  |
  |   |
265 | . | . | . | . | 270 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | M | A | M | C | I | R | D | M | M | Q |
Query Conservation |   |
  |
|
|   |
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
K | I | S | A | E | N | G | R | L | W | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|