Job Description P69922 Confidence 42.15% Date Thu Jan 5 12:12:22 GMT 2012 Rank 48 Aligned Residues 95 % Identity 13% Template c3ksmA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc-type sugar transport system, periplasmic component; PDBTitle: crystal structure of abc-type sugar transport system, periplasmic2 component from hahella chejuensis Resolution 1.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.
Predicted Secondary structure																																																								.																				.
Query SS confidence																																																								.																				.
Query Sequence		P	K	I	G	I	R	P	V	I	D	G	R	R	M	G	V	R	E	S	L	E	E	Q	T	M	N	M	A	K	A	T	A	A	L	L	T	E	K	L	R	H	A	C	G	A	A	V	E	C	V	I	S	D	T	.	C	I	A	G	M	A	E	A	A	A	C	E	E	K	F	S	S	Q	N	.	V	G	L	T	I
Query Conservation																																																								.																				.
Alig confidence														.	.	.	.	.					.	.	.	.													.	.	.	.	.	.	.											.																				.
Template Conservation														.	.	.	.	.					.	.	.	.													.	.	.	.	.	.	.
Template Sequence		P	K	L	L	L	V	L	K	G	D	S	N	.	.	.	.	.	A	Y	W	R	.	.	.	.	Q	V	Y	L	G	A	Q	K	A	A	D	E	.	.	.	.	.	.	.	A	G	V	T	L	L	H	R	S	T	K	D	D	G	D	I	A	G	Q	I	Q	I	L	S	Y	H	L	S	Q	A	P	P	D	A	L	I
Template Known Secondary structure									S		S	S	S	.	.	.	.	.	T				.	.	.	.													.	.	.	.	.	.	.		T									S	S	T	T																S			S
Template Predicted Secondary structure														.	.	.	.	.					.	.	.	.													.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.								.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	T	P	C	W	C	Y	G	S	E	T	I	D	M	D	P	T	R	P	K	A	I	W	G	F	N	G	T	E	R	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	P	N	S	A	E	D	L	T	P	S	V	A	Q	Y	R	A	R	N	I	P	V	L	V	V	D	S	D	L	A	G	D
Template Known Secondary structure					S	S	T	T	T	T										T	T							S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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