Job Description P69922 Confidence 100.00% Date Thu Jan 5 12:12:22 GMT 2012 Rank 2 Aligned Residues 572 % Identity 65% Template c3a9rA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:d-arabinose isomerase; PDBTitle: x-ray structures of bacillus pallidus d-arabinose2 isomerasecomplex with (4r)-2-methylpentane-2,4-diol Resolution 1.77 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	K	I	G	I	R	P	V	I	D	G	R	R	M	G	V	R	E	S	L	E	E	Q	T	M	N	M	A	K	A	T	A	A	L	L	T	E	K	L	R	H	A	C	G	A	A	V	E	C	V	I	S	D	T	C	I	A	G	M	A	E	A	A	A	C	E	E	K	F	S	S	Q	N	V	G	L	T	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	K	I	G	I	R	P	T	I	D	G	R	R	K	G	V	R	E	S	L	E	E	T	T	M	N	M	A	K	A	V	A	K	L	L	E	E	N	V	F	Y	Y	N	G	Q	P	V	E	C	V	I	A	D	T	C	I	G	G	V	K	E	A	A	E	A	A	E	K	F	A	R	E	G	V	G	V	S	I	T
Template Known Secondary structure										B					T	T	T	T	T	T	T	T																				B		T	T	S		B							S	S		B		S															T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	P	C	W	C	Y	G	S	E	T	I	D	M	D	P	T	R	P	K	A	I	W	G	F	N	G	T	E	R	P	G	A	V	Y	L	A	A	A	L	A	A	H	S	Q	K	G	I	P	A	F	S	I	Y	G	H	D	V	Q	D	A	D	D	T	S	I	P	A	D	V	E	E	K	L	L	R	F	A	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	P	C	W	C	Y	G	T	E	T	M	D	M	D	P	H	I	P	K	A	V	W	G	F	N	G	T	E	R	P	G	A	V	Y	L	A	A	V	L	A	G	Y	N	Q	K	G	L	P	A	F	G	I	Y	G	K	D	V	Q	D	A	G	D	T	N	I	P	E	D	V	K	E	K	L	I	R	F	A	K	A
Template Known Secondary structure				S	S												T	T	S										S	S	S																	T									S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	V	A	S	M	K	G	K	S	Y	L	S	L	G	G	V	S	M	G	I	A	G	S	I	V	D	H	N	F	F	E	S	W	L	G	M	K	V	Q	A	V	D	M	T	E	L	R	R	R	I	D	Q	K	I	Y	D	E	A	E	L	E	M	A	L	A	W	A	D	K	N	F	R	Y	G	E	D	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	A	V	A	M	M	K	G	K	S	Y	L	S	I	G	S	V	S	M	G	I	A	G	S	V	V	Q	E	D	F	F	Q	N	Y	L	G	M	R	N	E	Y	V	D	M	S	E	F	V	R	R	I	E	L	G	I	Y	D	K	E	E	Y	E	R	A	L	K	W	V	K	E	N	C	K	V	G	P	D	N	N
Template Known Secondary structure									T	T							S	S			T	T		G	G	G	S																			T									T	T		S																		B					S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		N	K	Q	Y	Q	R	N	A	E	Q	S	R	A	V	L	R	E	S	.	.	.	.	L	L	M	A	M	C	I	R	D	M	M	Q	G	N	S	K	L	A	D	I	G	R	V	E	E	S	L	G	Y	N	A	I	A	A	G	F	Q	G	Q	R	H	W	T	D	Q	Y	P	N	G	D	T	A	E	A	I	L	N	S
Query Conservation																				.	.	.	.
Alig confidence		.	.	.	.															.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	R	D	G	F	K	R	T	E	E	Q	K	E	K	D	W	E	I	S	V	K	M	A	L	I	A	R	D	L	M	V	G	N	K	K	L	E	E	M	G	Y	G	E	E	A	L	G	R	N	A	I	V	A	G	F	Q	G	Q	R	Q	W	T	D	Y	F	P	N	G	D	F	M	E	T	I	L	N	S
Template Known Secondary structure		.	.	.	.		G	G	G																																		T	T																		T	T	T	T	T	T	T	S			S									S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	D	W	N	G	V	R	E	P	F	V	V	A	T	E	N	D	S	L	N	G	V	A	M	L	M	G	H	Q	L	T	G	T	A	Q	V	F	A	D	V	R	T	Y	W	S	P	E	A	I	E	R	V	T	G	H	K	L	D	G	L	A	E	H	G	I	I	H	L	I	N	S	G	S	A	A	L	D	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	D	W	N	G	K	R	A	P	Y	I	F	A	T	E	N	D	N	L	N	G	I	S	M	L	F	G	Y	L	L	T	N	T	A	Q	I	F	A	D	V	R	T	Y	W	S	P	E	A	V	K	R	V	T	G	Y	T	L	E	G	R	A	A	N	G	I	I	H	L	I	N	S	G	A	A	A	L	D	G	T
Template Known Secondary structure		S			T	T											T	T																	S																					S					G	G	G	G	G								S	S				G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	Q	R	D	S	E	G	N	P	T	M	K	P	H	W	E	I	S	Q	Q	E	A	D	A	C	L	A	A	T	E	W	C	P	A	I	H	E	Y	F	R	G	G	G	Y	S	S	R	F	L	T	E	G	G	V	P	F	T	M	T	R	V	N	I	I	K	G	L	G	P	V	L	Q	I	A	E	G	W	S	V
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		G	E	Q	T	K	D	.	G	K	P	V	I	K	P	Y	Y	E	L	T	D	E	D	I	K	K	C	L	E	A	T	Q	F	R	P	A	S	T	E	Y	F	R	G	G	G	Y	S	T	D	F	L	T	K	G	G	M	P	V	T	I	S	R	L	N	I	V	K	G	L	G	P	V	L	Q	I	A	E	G	Y	T	V
Template Known Secondary structure							T	.	T							G	G	G												T								T	T	T		T	T								B			S	S												T	T	T
Template Predicted Secondary structure								.
Template SS confidence
		407	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	P	K	D	V	H	D	I	L	N	K	R	T	N	S	T	W	P	T	T	W	F	A	P	R	L	T	G	K	G	P	F	T	D	V	Y	S	V	M	A	N	W	G	A	N	H	G	V	L	T	I	G	H	V	G	A	D	F	I	T	L	A	S	M	L	R	I	P	V	C	M	H	N	V	E	E	T	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	P	E	E	V	H	D	V	L	D	K	R	T	D	P	T	W	P	T	T	W	F	V	P	N	L	T	G	E	G	A	F	K	D	V	Y	S	V	M	N	N	W	G	A	N	H	C	S	I	S	Y	G	H	I	G	A	D	L	I	T	L	A	S	I	L	R	I	P	V	N	M	H	N	V	P	E	E	K	I
Template Known Secondary structure														T	T		T	T	S		B									S	S	G	G	G	S	S							T			S	S							S														T										G	G	G
Template Predicted Secondary structure
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
		562	.	.	.	.	.	.	.	570	.	.		.	.	.	.	.	.	.	580	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		Y	R	P	S	A	W	A	A	H	G	M	.	D	I	E	G	Q	D	Y	R	A	C
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		F	R	P	D	A	W	S	M	F	G	T	K	D	L	E	G	A	D	Y	R	A	C
Template Known Secondary structure					G	G	G	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.