Job Description P69922 Confidence 24.82% Date Thu Jan 5 12:12:22 GMT 2012 Rank 110 Aligned Residues 82 % Identity 16% Template c2p1nD_ PDB info PDB header:signaling protein Chain: D: PDB Molecule:skp1-like protein 1a; PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase Resolution 2.50 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.																		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	D	A	D	D	T	S	I	P	A	D	V	E	E	K	L	L	R	F	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	L	A	V	A	S	M	K	G	K	S	Y	L	S	L	G	G	V	S	M	G	I	A	G	S	I	V	D	H	N	F	F	E	S	W	L	G	M	K	V
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	G	V	P	L	P	N	V	T	S	K	I	L	A	K	V	I	E	Y	C	K	R	H	W	D	A	D	F	M	K	I	D	Q	A	T	L	F	E	L	I	L	A	A	N	Y	L	N	I	K	N	L	L	D	L	T	C	Q	T	V	A	D	M	I	K	G	K	T	P	E	E	I	R	T	T	F	N	I	K	N
Template Known Secondary structure								T	T																		T	T	T	T	T																		T																	T	T										S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	V	D	M	T	E	L	R	R	R	I	D	Q	K	I	Y	D	E	A	E	L	E	M	A	L	A	W	A	D	K
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.			.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.			.	.	.	.
Template Sequence		D	F	T	P	.	.	.	.	.	.	.	.	E	E	.	.	.	.	E	E	E	V	R	R	E	N	Q	W	A	F	E
Template Known Secondary structure						.	.	.	.	.	.	.	.			.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.			.	.	.	.
Template SS confidence
		142	.	.	.									.	.					.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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