Job Description P69922 Confidence 20.32% Date Thu Jan 5 12:12:22 GMT 2012 Rank 129 Aligned Residues 89 % Identity 13% Template c2hqbA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional activator of comk gene; PDBTitle: crystal structure of a transcriptional activator of comk2 gene from bacillus halodurans Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	I	R	P	V	I	D	G	R	R	M	G	V	R	E	S	L	E	E	Q	T	M	N	M	A	K	A	T	A	A	L	L	T	E	K	L	R	H	A	C	G	A	A	V	E	C	V	I	S	D	T	C	I	A	G	M	A	E	A	A	A	C	E	E	K	F	S	S	Q	N	V	G	L	T	I	T	V	T	P
Query Conservation
Alig confidence						.					.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.													.
Template Conservation						.					.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.													.
Template Sequence		V	G	L	L	.	V	E	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	N	R	K	A	Y	E	G	L	L	N	I	H	S	N	.	.	.	L	D	V	D	V	V	L	E	E	G	V	N	.	S	E	Q	K	A	H	R	R	I	K	E	L	V	D	G	G	V	N	L	I	F	G	H	G	H
Template Known Secondary structure						.					.	.	.	.	.	.	.	.	.	.	.	.	.	.			T														.	.	.	S												.	S														T	T								S	T
Template Predicted Secondary structure						.					.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.													.
Template SS confidence
		2	.	.	.		.	.	.	.															10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	W	C	Y	G	S	E	T	I	D	M	D	P	T	R	P	K	A	I	W	G	F	N	G	T	E	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	A	E	Y	F	S	T	I	H	N	Q	Y	P	D	V	H	F	V	S	F	N	G	E	V	K	G	E
Template Known Secondary structure									T	T	T	T	S		T	T	S						S					S	S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions