Job Description P76004 Confidence 100.00% Date Thu Jan 5 12:17:15 GMT 2012 Rank 10 Aligned Residues 194 % Identity 29% Template d1gtta1 SCOP info FAH FAH FAH Resolution 1.7

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.
Query Sequence		V	S	K	V	V	C	V	G	S	N	Y	A	K	H	I	K	E	M	G	S	A	V	.	.	.	.	.	.	.	.	P	E	E	P	V	L	F	I	K	P	E	T	A	L	C	D	L	R	Q	P	L	A	I	P	S	D	F	G	S	V	H	H	E	V	E	L	A	V	L	I	G	A	T	L	R	Q	A	T	E	E
Query Conservation																								.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																										.
Template Conservation																																																									.
Template Sequence		K	G	T	I	F	A	V	A	L	N	H	R	S	Q	L	D	A	W	Q	E	A	F	Q	Q	S	P	Y	K	A	P	P	K	T	A	V	W	F	I	K	P	R	N	T	V	I	G	C	G	E	P	I	P	F	P	Q	.	G	E	K	V	L	S	G	A	T	V	A	L	I	V	G	K	T	A	T	K	V	R	E	E
Template Known Secondary structure			S							S		B								T	T	G	G	G	S	T	T	T		S			S	S								G	G	G				T	T							T	.	T															S		B	S	S			G	G
Template Predicted Secondary structure																																																									.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	R	K	A	I	A	G	Y	G	V	A	L	D	L	T	L	R	D	V	Q	G	K	M	K	K	A	G	Q	P	W	E	K	A	K	A	F	D	N	S	C	P	L	S	G	F	I	P	A	A	E	F	T	G	D	P	Q	N	T	T	L	S	L	S	V	N	G	E	Q	R	Q	Q	G	T	T	A	D	M	I	H
Query Conservation
Alig confidence																							.	.	.	.	.																									.	.	.	.
Template Conservation																							.	.	.	.	.																									.	.	.	.
Template Sequence		D	A	A	E	Y	I	A	G	Y	A	L	A	N	D	V	S	L	P	E	E	S	.	.	.	.	.	F	Y	R	P	A	I	K	A	K	C	R	D	G	F	C	P	I	G	E	T	V	A	L	S	.	.	.	.	N	V	D	N	L	T	I	Y	T	E	I	N	G	R	P	A	D	H	W	N	T	A	D	L	Q	R
Template Known Secondary structure		G	G	G	G	G											B	S					.	.	.	.	.	S	S	S								S	T	T				B				B			S	.	.	.	.			T	T								T	T								G	G	G	B	S	S
Template Predicted Secondary structure																							.	.	.	.	.																									.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		K	I	V	P	L	I	A	Y	M	S	K	F	F	T	L	K	A	G	D	V	V	L	T	G	T	P	D	G	V	G	P	L	Q	S	G	D	E	L	T	V	T	F	D	G	H	S	.	L	T	T	R	V	L
Query Conservation																																																.
Alig confidence																																																.
Template Conservation
Template Sequence		N	A	A	Q	L	L	S	A	L	S	E	F	A	T	L	N	P	G	D	A	I	L	L	G	T	P	Q	A	R	V	E	I	Q	P	G	D	R	V	R	V	L	A	E	G	F	P	P	L	E	N	P	V	V
Template Known Secondary structure												T	T	S		B		T	T									S							T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions