Job Description P76004 Confidence 100.00% Date Thu Jan 5 12:17:15 GMT 2012 Rank 9 Aligned Residues 190 % Identity 38% Template c3qdfA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; PDBTitle: crystal structure of 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase2 from mycobacterium marinum Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	P	V	S	K	V	V	C	V	G	S	N	Y	A	K	H	I	K	E	M	G	S	A	V	P	E	E	P	V	L	F	I	K	P	E	T	A	L	C	D	L	R	Q	P	L	A	I	P	S	D	F	G	S	V	H	H	E	V	E	L	A	V	L	I	G	A	T	L	R	Q	A	T	E	E	H	V	R	K	A
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	L	A	S	K	V	V	C	V	G	K	N	Y	T	.	.	.	.	.	.	.	.	.	.	P	A	D	P	V	I	F	L	K	P	N	T	A	I	V	G	P	N	V	P	I	R	L	P	A	N	A	S	P	V	H	F	E	G	E	L	A	I	V	I	G	R	P	C	K	D	V	S	A	A	Q	A	V	D	N
Template Known Secondary structure		S				S						S	S		B		.	.	.	.	.	.	.	.	.	.											G	G	G				T	T							T	T			S													S		B	S	S			G	G	G	G	G	G	G
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.											.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	G	Y	G	V	A	L	D	L	T	L	R	D	V	Q	G	K	M	K	K	A	G	Q	P	W	E	K	A	K	A	F	D	N	S	C	P	L	S	G	F	I	P	A	A	E	F	T	G	D	P	Q	N	T	T	L	S	L	S	V	N	G	E	Q	R	Q	Q	G	T	T	A	D	M	I	H	K	I	V	P	L
Query Conservation
Alig confidence																					.	.	.	.																								.	.	.
Template Conservation																					.	.	.	.																								.	.	.
Template Sequence		I	L	G	Y	T	I	G	N	D	V	S	A	R	D	Q	Q	K	S	D	.	.	.	.	G	Q	W	T	R	A	K	G	H	D	T	F	C	P	V	G	P	W	I	V	T	D	V	.	.	.	D	P	A	D	L	E	L	R	T	E	V	N	G	A	V	K	Q	H	A	R	T	S	L	M	I	H	D	V	G	A	I
Template Known Secondary structure																					.	.	.	.	S	S	S						S	T	T										S	S		.	.	.		G	G	G								T	T								G	G	G	B	S	S
Template Predicted Secondary structure																					.	.	.	.																								.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		I	A	Y	M	S	K	F	F	T	L	K	A	G	D	V	V	L	T	G	T	P	D	G	V	G	P	L	Q	S	G	D	E	L	T	V	T	F	D	G	H	S	.	L	T	T	R	V	L
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		V	E	W	I	S	A	V	M	T	L	L	P	G	D	L	I	L	T	G	T	P	A	G	V	G	P	I	E	D	G	D	T	V	S	I	T	I	E	G	I	G	T	L	T	N	P	V	V
Template Known Secondary structure									S		B		T	T									S							T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions