Return to main results Retrieve Phyre Job Id

Job DescriptionP76004
Confidence36.72%DateThu Jan 5 12:17:15 GMT 2012
Rank21Aligned Residues56
% Identity18%Templatec3cwiA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:thiamine-biosynthesis protein this; PDBTitle: crystal structure of thiamine biosynthesis protein (this)2 from geobacter metallireducens. northeast structural3 genomics consortium target gmr137
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   150.........160.........170....... ..180.........190.........200.......
Predicted Secondary structure 






....



















Query SS confidence 



























. . . .





























Query Sequence  LSVNGEQRQQGTTADMIHKIVPLIAYMS. . . . KFFTLKAGDVVLTGTPDGVGPLQSGDELTV
Query Conservation    



  
      
      


 

....   

 




 



 
   
  

 
 
Alig confidence 















..









....





























Template Conservation 
 


           ..

  

  
       


  
  



  
    
 


 


Template Sequence  LTVNGKPSTVDGAESL. . NVTELLSALKVAQAEYVTVELNGEVLEREAFDATTVKDGDAVEF
Template Known Secondary structure  TT
TT
S..TT
TTGGG
TT

GGGTTT
TT
Template Predicted Secondary structure 







..

















Template SS confidence 





























































   3......10........ .20.........30.........40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions