 |
| Job Description | P76004 | | Confidence | 4.09% | Date | Thu Jan 5 12:17:15 GMT 2012 |
| Rank | 96 | Aligned Residues | 28 |
| % Identity | 21% | Template | c2kjdA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:sodium/hydrogen exchange regulatory cofactor nhe- |
PDBTitle: solution structure of extended pdz2 domain from nherf1 (150-2 270)
|
| Resolution | UNK |
|
| | |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | |  |
|
|
|
|
|
| | |
|
|
|
|
| | | | | | | |
|
| | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
V | L | T | G | T | P | D | G | V | G | P | L | Q | S | G | D | E | L | T | V | T | F | D | G | H | S | L | T | T |
| Query Conservation | |
| |
|
|
|
| |
| | | |
| | |
|
| |
| |
| |
|
|
| |
|
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | |
|
|
|
| | | |
|
| | |
|
| |
| . |
| |
|
|
| | |
| | |
| Template Sequence | |
V | D | P | D | S | P | A | E | A | S | G | L | R | A | Q | D | R | I | . |
V | E | V | N | G | V | C | M | E | G |
| Template Known Secondary structure | |
|
| T | T | S |  | | | | | T |
|
| T | T |
| | | . | | | | T | T | | |
| T | T |
| Template Predicted Secondary structure | |
| |
|
|
| | | |
|
|
|
|
|
|
|
| | | . | | | |
|
| | |
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
. | . | 60 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
