 |
Job Description | P76004 | Confidence | 8.69% | Date | Thu Jan 5 12:17:15 GMT 2012 |
Rank | 49 | Aligned Residues | 25 |
% Identity | 32% | Template | c2e6zA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcription elongation factor spt5; |
PDBTitle: solution structure of the second kow motif of human2 transcription elongation factor spt5
|
Resolution | UNK |
|
  |   |
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | |
|
. | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
D | G | V | G | P | L | Q | S | G | D | E | L | T | V | T | F | D | G | . |
. |
H | S | L | T | T | R | V | L |
Query Conservation |   |
  |
|   |   |   |
|   |   |
|
|   |
|   |
|   |
|
|
| . | . |   |
|
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |
|
|   |
|
|
| . |   |   |
|
|
|   |   |
|   |
|   |
|   |
Template Sequence |   |
S | G | S | S | G | F | Q | P | G | D | N | V | E | V | . |
C | E | G | E | L | I | N | L | Q | G | K | I | L |
Template Known Secondary structure |   |
|
|
| S | S |
|
| T | T | S |  |  |  |  | . |
| S | S | T | T | T | T |
|  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  | . |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
415 | . | . | . | . | 420 | . | . | . | . | . | . | . | . | |
. | 430 | . | . | . | . | . | . | . | . | . | 440 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|