Job Description P76004 Confidence 100.00% Date Thu Jan 5 12:17:15 GMT 2012 Rank 7 Aligned Residues 204 % Identity 35% Template c1wzoC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:hpce; PDBTitle: crystal structure of the hpce from thermus thermophilus hb8 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		Q	H	H	N	W	Q	G	A	L	L	D	Y	P	.	.	V	S	K	V	V	C	V	G	S	N	Y	A	K	H	I	K	E	M	G	S	A	V	P	E	E	P	V	L	F	I	K	P	E	T	A	L	C	D	L	R	Q	P	L	A	I	P	S	D	F	G	S	V	H	H	E	V	E	L	A	V	L	I	G	A	T
Query Conservation															.	.
Alig confidence															.	.															.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.
Template Sequence		E	A	H	R	P	E	D	V	T	W	L	L	P	F	T	P	G	K	I	L	G	V	A	L	N	Y	A	R	P	.	.	.	.	.	.	.	.	.	E	E	P	A	L	F	W	K	P	N	T	S	L	L	P	H	K	G	V	V	L	Y	P	K	G	A	R	F	V	H	Y	E	V	E	L	A	V	V	V	G	R	P
Template Known Secondary structure						G	G	G	S					S	S										S		B				.	.	.	.	.	.	.	.	.	S	S								G	G	G				T	T							T	T		S														S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.										.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	A	T	E	E	H	V	R	K	A	I	A	G	Y	G	V	A	L	D	L	T	L	R	D	V	Q	G	K	M	K	K	A	G	Q	P	W	E	K	A	K	A	F	D	N	S	C	P	L	S	G	F	I	P	A	A	E	F	T	G	D	P	Q	N	T	T	L	S	L	S	V	N	G	E	Q	R	Q	Q	G
Query Conservation
Alig confidence																																		.	.	.																										.
Template Conservation																																		.	.	.																										.
Template Sequence		M	K	R	V	R	A	K	D	A	L	D	Y	V	L	G	Y	T	I	A	N	D	L	V	A	R	D	Y	V	T	N	T	F	.	.	.	R	P	P	I	R	A	K	G	R	D	T	F	L	P	L	G	P	F	L	V	V	E	E	V	E	.	D	P	Q	D	L	W	L	R	A	Y	V	N	G	E	L	R	Q	E	G
Template Known Secondary structure		B	S	S							G	G	G													G	G	G		S		S	S	.	.	.	S							S	S	T	T											S			S	.		T	T	S								T	T
Template Predicted Secondary structure																																		.	.	.																										.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		T	T	A	D	M	I	H	K	I	V	P	L	I	A	Y	M	S	K	F	F	T	L	K	A	G	D	V	V	L	T	G	T	P	D	G	V	G	P	L	Q	S	G	D	E	L	T	V	T	F	D	G	H	S	.	L	T	T	R	V	L
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		H	T	S	R	M	L	Y	S	V	A	E	L	L	E	F	I	S	E	F	M	T	L	E	P	Y	D	V	L	L	T	G	T	P	K	G	I	S	Q	V	R	P	G	D	V	M	R	L	E	I	E	G	L	G	A	L	E	N	P	I	E
Template Known Secondary structure			G	G	G	B	S	S											T	T	S		B		T	T										S			B			T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions