Job Description P76004 Confidence 100.00% Date Thu Jan 5 12:17:15 GMT 2012 Rank 2 Aligned Residues 199 % Identity 39% Template c1i7oC_ PDB info PDB header:isomerase, lyase Chain: C: PDB Molecule:4-hydroxyphenylacetate degradation bifunctional PDBTitle: crystal structure of hpce Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	D	Y	P	V	S	K	V	V	C	V	G	S	N	Y	A	K	H	I	K	E	M	G	S	A	V	P	E	E	P	V	L	F	I	K	P	E	T	A	L	C	D	L	R	Q	P	L	A	I	P	S	D	F	G	S	V	H	H	E	V	E	L	A	V	L	I	G	A	T	L	R	Q	A	T	E	E	H	V
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.
Template Sequence		P	T	L	P	H	P	H	G	T	L	F	A	L	G	L	N	Y	A	D	H	.	.	.	.	.	.	.	.	P	E	E	P	L	V	F	L	K	A	P	N	T	L	T	G	D	N	Q	T	S	V	R	P	N	N	I	E	Y	M	H	Y	E	A	E	L	V	V	V	I	G	K	Q	A	R	N	V	S	E	A	D	A
Template Known Secondary structure					S	S	S		S							S		B				.	.	.	.	.	.	.	.			S								G	G	G				T	T							T	T		S														S		B	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.									.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	A	I	A	G	Y	G	V	A	L	D	L	T	L	R	D	V	Q	G	K	M	K	K	A	G	Q	P	W	E	K	A	K	A	F	D	N	S	C	P	L	S	G	F	I	P	A	A	E	F	T	G	D	P	Q	N	T	T	L	S	L	S	V	N	G	E	Q	R	Q	Q	G	T	T	A	D	M	I	H	K	I
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		M	D	Y	V	A	G	Y	T	V	C	N	D	Y	A	I	R	D	Y	L	.	.	.	E	N	Y	Y	R	P	N	L	R	V	K	S	R	D	G	L	T	P	M	L	S	T	I	V	P	K	E	A	I	P	D	P	H	N	L	T	L	R	T	F	V	N	G	E	L	R	Q	Q	G	T	T	A	D	L	I	F	S	V
Template Known Secondary structure		G	G	G													G	G	G		.	.	.		S	S	S	S	S						S		T	T				B		S					G	G	G		S		G	G	G								T	T								G	G	G	B	S	S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		V	P	L	I	A	Y	M	S	K	F	F	T	L	K	A	G	D	V	V	L	T	G	T	P	D	G	V	G	P	L	Q	S	G	D	E	L	T	V	T	F	D	G	H	S	.	L	T	T	R	V	L
Query Conservation																																														.
Alig confidence																																														.
Template Conservation
Template Sequence		P	F	L	I	A	Y	L	S	E	F	M	T	L	N	P	G	D	M	I	A	T	G	T	P	K	G	L	S	D	V	V	P	G	D	E	V	V	V	E	V	E	G	V	G	R	L	V	N	R	I	V
Template Known Secondary structure										T	T	S		B		T	T									S				B			T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions