Job Description P39173 Confidence 4.25% Date Thu Jan 5 11:58:21 GMT 2012 Rank 57 Aligned Residues 244 % Identity 9% Template c3mi6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of the alpha-galactosidase from lactobacillus2 brevis, northeast structural genomics consortium target lbr11. Resolution 2.70 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.									.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																									.										.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence																									.										.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		S	R	R	K	L	D	E	L	D	L	I	V	V	D	H	P	Q	V	K	A	S	F	A	.	L	Q	G	A	H	L	L	S	W	.	.	.	.	K	P	A	G	E	E	E	V	L	W	L	S	N	N	T	P	F	K	N	G	V	A	.	.	.	.	.	.	.	.	I	R	G	G	V	P	V	C	W	P	W	F	G
Query Conservation																									.										.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence																									.										.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	H	V	N	E	A	N	L	T	F	H	L	Q	T	D	H	T	S	Y	I	F	Q	I	X	K	N	G	E	A	G	Q	I	Y	Y	G	P	R	I	H	V	Q	P	T	Y	Q	N	L	X	S	Q	E	W	R	D	A	T	P	S	L	N	E	E	N	P	N	F	Q	P	A	T	I	K	A	E	Y	A	S	L	G
Template Known Secondary structure							T	T	T	T							S	S									T	T	S	S														S			T	G	G	G						S	S	S			S		T	T		T	T			G	G	G	S		B	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure								.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query SS confidence								.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Query Sequence		P	A	A	Q	Q	G	.	.	.	.	L	P	A	H	G	F	A	R	N	L	P	W	T	L	K	S	H	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	A	D	G	V	A	L	T	F	E	L	T	Q	S	E	E	T	K	K	F	W	P	H	D	F	T	L	L	A	H	F	R	V	.
Query Conservation								.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Alig confidence								.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.													.
Template Conservation																																																														.	.	.	.	.	.	.
Template Sequence		K	G	D	F	R	Q	P	A	F	Q	V	T	Q	A	N	G	S	R	I	T	E	L	T	Y	D	H	Y	Q	L	L	T	G	K	Q	R	L	A	N	L	P	S	T	F	D	D	T	D	D	D	A	Q	T	L	V	V	S	F	N	D	R	.	.	.	.	.	.	.	I	T	G	L	A	L	D	L	N	Y	S	I	F
Template Known Secondary structure		S	S			S			S						T	T	S																S					S	S	S							S														T	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.								.	.	.	.	.	.	.	.	150	.	.	.	.
								144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	G	K	T	C	E	I	D	L	E	S	H	G	E	F	E	T	T	S	A	L	H	T	Y	F	N	V	G	D	I	A	K	V	S	V	S	G	L	G	D	R	F	I	D	K	V	N	D	A	K	E	N	V	L	T	D	G	I	Q	T	F	P	D	R	T	D	R	V	Y	L	N	P	Q	D	C
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																																			.	.
Template Conservation																																																										.	.
Template Sequence		P	H	Q	D	V	I	V	K	S	A	K	F	T	N	P	S	S	E	K	L	V	L	N	R	A	L	S	S	Q	L	D	L	P	D	A	N	Y	D	L	I	Q	F	S	G	T	W	A	R	E	R	H	L	Y	R	H	P	.	.	L	R	P	G	X	Q	S	I	S	S	L	R	X	A	S	S	H	Q	Q	N	P	F
Template Known Secondary structure		G	G	G	T												S	S	S															S													T	T										.	.			S									S	S	S	S		S	S	B		S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		218	.	220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.
Query Sequence		S	V	I	N	D	E	A	L	N	R	.	.	.	.	.	.	I	I	A	V	G	H	Q	H	H	L	N	V	V	G	W	N	P	G	P	A	L	S	I	S	M	G	D	M	P	D	D	G	Y	K	T	F	V	C	V	E	T	A	Y	A	S	E	T	Q	K	V	T	K	E	K	P	A	H
Query Conservation												.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	X	L	A	R	P	Q	T	T	D	E	Q	G	A	V	F	G	F	N	L	V	Y	S	G	N	F	L	D	A	I	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	Y	S	T	S	R	I	L	T	G	I	N	P	D	E	F	G	W	N	L	A	P	Q	A	T	F	Q
Template Known Secondary structure							T	T			S	S	S	B								S			S	S								.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S										S	T	T							T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.														.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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