Job Description P39173 Confidence 100.00% Date Thu Jan 5 11:58:21 GMT 2012 Rank 4 Aligned Residues 253 % Identity 20% Template c3k25B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:slr1438 protein; PDBTitle: crystal structure of slr1438 protein from synechocystis sp. pcc 6803,2 northeast structural genomics consortium target sgr112 Resolution 2.55 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90										.
Predicted Secondary structure																				.	.	.																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.																																																		.	.	.	.	.	.	.	.	.
Query Sequence		D	E	L	D	L	I	V	V	D	H	P	Q	V	K	A	S	F	A	.	.	.	L	Q	G	A	H	L	L	S	W	K	P	A	G	E	E	E	V	L	W	L	S	N	N	T	P	F	K	N	G	V	A	I	R	G	G	V	P	V	C	W	P	W	F	G	P	A	A	Q	Q	.	.	.	.	.	.	.	.	.	G
Query Conservation																				.	.	.																																																		.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.													.																																					.	.	.	.	.	.	.	.	.
Template Conservation																																			.
Template Sequence		D	R	P	L	T	Y	H	L	E	D	D	Q	S	L	A	R	L	S	L	V	P	G	R	G	G	L	V	T	E	W	T	V	Q	.	G	Q	P	I	L	Y	F	D	R	E	R	F	Q	D	P	S	L	S	V	R	G	G	I	P	I	L	F	P	I	C	G	N	L	P	Q	D	Q	F	N	H	A	G	K	S	Y	R
Template Known Secondary structure												T	T	T	T							T	T	S	S	S								T	.	T				B		B						T	S	T	T	S				B	S					B	S		S	S			G	G	G				S	S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		L	P	A	H	G	F	A	R	N	L	P	W	T	L	K	S	H	H	E	D	A	D	G	V	A	L	T	F	E	L	T	Q	S	E	E	T	K	K	F	W	P	H	D	F	T	L	L	A	H	F	R	V	G	K	.	.	.	.	.	T	C	E	I	D	L	E	S	H	G	E	F	E	T	T	S	A	L	H	T	Y
Query Conservation																																																								.	.	.	.	.
Alig confidence																				.																																				.	.	.	.	.
Template Conservation																				.
Template Sequence		L	K	Q	H	G	F	A	R	D	L	P	W	E	V	I	G	Q	Q	.	T	Q	D	N	A	R	L	D	L	R	L	S	H	N	D	A	T	L	E	A	F	P	F	A	F	E	L	V	F	S	Y	Q	L	Q	G	H	S	L	R	I	E	Q	R	I	A	N	L	G	D	Q	R	X	P	F	S	L	G	F	H	P	Y
Template Known Secondary structure				T	T	B	S	T	T	T	S									.		S	S	S																	S		S												T	T												S	S	S
Template Predicted Secondary structure																				.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																.																							.
Query SS confidence																																																.																							.
Query Sequence		F	N	V	G	D	I	A	K	V	S	V	S	G	L	G	D	R	F	I	D	K	V	N	D	A	K	E	N	V	L	T	D	G	I	Q	T	F	P	D	R	T	D	R	V	Y	L	.	N	P	Q	D	C	S	V	I	N	D	E	A	L	N	R	I	I	A	V	G	H	Q	.	H	H	L	N	V	V	G	W	N	P
Query Conservation																																																.																							.
Alig confidence																																						.										.																							.
Template Conservation																																						.
Template Sequence		F	F	C	R	E	K	L	G	I	T	L	A	I	P	A	N	D	Y	L	D	Q	K	T	G	D	C	H	G	Y	D	G	Q	L	N	L	T	.	S	P	E	L	D	L	A	F	T	Q	I	S	Q	P	R	A	H	F	I	D	P	D	R	N	L	K	I	E	V	S	F	S	E	L	Y	Q	T	L	V	L	W	T	V
Template Known Secondary structure					S			T	T							B	S					T	T	T	T							S				T	T	.	S	S									B	S	S	S							T	T	T	T									T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.									.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.
Query Sequence		G	P	A	L	S	I	S	M	G	D	M	P	D	D	G	Y	K	T	F	V	C	V	E	T	A	Y	A	S	E	T	Q	.	.	.	.	.	.	.	.	K	V	T	K	E	K	P	A	H	L	A	Q	S	I	R	V	A	K
Query Conservation																																	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	L	C	L	E	P	W	S	G	P	R	N	A	L	N	S	G	E	Q	L	A	W	V	E	P	Y	S	S	R	S	A	W	V	N	F	Q	V	S	T
Template Known Secondary structure		S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S								S	S		T	T						T	T						T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		246	.	.															.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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