Job Description P39173 Confidence 100.00% Date Thu Jan 5 11:58:21 GMT 2012 Rank 11 Aligned Residues 272 % Identity 16% Template c3imhB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:galactose-1-epimerase; PDBTitle: crystal structure of galactose 1-epimerase from lactobacillus2 acidophilus ncfm Resolution 1.76 Å

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		13	.	.	.	.	.	.	20	.		.	.	.	.			.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure											.					.	.											.																																																			.	.	.
Query SS confidence											.					.	.											.																																																			.	.	.
Query Sequence		Q	I	S	P	V	L	S	R	R	.	K	L	D	E	.	.	L	D	L	I	V	V	D	H	P	Q	.	V	K	A	S	F	A	L	Q	G	A	H	L	L	S	W	K	P	A	G	E	E	E	V	L	W	L	S	N	N	T	P	F	K	N	G	V	A	I	R	G	G	V	P	V	C	W	P	W	F	G	.	.	.
Query Conservation											.					.	.											.																																																			.	.	.
Alig confidence											.					.	.											.																																											.	.							.	.	.
Template Conservation																																																																							.	.
Template Sequence		S	L	K	T	N	F	V	K	Y	E	R	K	D	N	K	D	L	C	E	I	T	L	E	N	D	A	G	M	A	V	K	V	L	N	Y	G	A	T	L	E	K	V	L	L	D	G	E	N	M	I	L	S	L	N	S	P	E	D	Y	S	K	E	R	N	F	L	G	G	T	.	.	V	G	R	I	A	G	R	V	R
Template Known Secondary structure														T	T											S	S	S							T	B	T	T								T	T				B				S	S	G	G	G	G	G	T	S				T	T			.	.			S	B		S			G
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.
								86	.	.	.	90	.	.	.	.								.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.
Predicted Secondary structure		.	.	.	.	.	.										.	.	.	.	.	.	.					.	.																																																.	.	.	.
Query SS confidence		.	.	.	.	.	.										.	.	.	.	.	.	.					.	.																																																.	.	.	.
Query Sequence		.	.	.	.	.	.	P	A	A	Q	Q	G	L	P	A	.	.	.	.	.	.	.	H	G	F	A	.	.	R	N	L	P	W	T	L	K	S	H	H	E	D	A	D	G	V	A	L	T	F	E	L	T	Q	S	E	E	T	K	K	F	W	P	H	D	F	T	L	L	A	H	F	R	V	G	K	.	.	.	.	T
Query Conservation		.	.	.	.	.	.										.	.	.	.	.	.	.					.	.																																																.	.	.	.
Alig confidence		.	.	.	.	.	.										.	.	.	.	.	.	.					.	.												.													.																							.	.	.	.
Template Conservation																																									.													.
Template Sequence		A	G	Q	W	K	H	G	N	E	I	H	Q	L	P	L	N	D	G	D	N	H	I	H	G	G	I	G	T	D	M	H	V	W	D	F	R	P	S	C	.	D	S	E	H	A	R	V	D	L	T	L	F	.	D	P	D	G	N	N	D	Y	P	G	N	L	K	L	H	A	R	Y	E	L	D	N	E	N	N	L	H
Template Known Secondary structure		G	G					T	T									B	T	T	B			T	T	S	S		G	G	G	S	B								.		S	S										.			T	T	G	G	G			S												T	T	S
Template Predicted Secondary structure																																									.													.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	E	I	D	L	E	S	H	G	E	F	E	T	T	S	A	L	H	T	Y	F	N	V	G	D	I	A	K	V	S	V	S	G	L	G	D	R	F	I	.	.	.	.	.	D	K	V	N	D	A	K	E	N	V	L	T	D	G	I	Q	T	F	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	L	E	A	V	S	D	K	L	T	I	F	N	P	V	N	H	T	Y	F	N	L	G	E	R	A	E	D	L	N	L	Q	M	N	A	D	Y	Y	L	P	V	D	E	A	G	L	P	D	R	G	M	A	E	V	A	G	T	A	F	D	F	R	K	T	K	R	I	G	D	A	L	N	S	D	D	S	Q	I	K
Template Known Secondary structure									S	S	S				B									T	T	S		G	G	G													B		T	T	S	S	B	S	S						T	T	S	T	T			S	S									T	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
					206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure		.	.	.																																								.																																.	.	.	.	.	.
Query SS confidence		.	.	.																																								.																																.	.	.	.	.	.
Query Sequence		.	.	.	R	T	D	R	V	Y	L	N	P	Q	D	C	S	V	I	N	D	E	A	L	N	R	I	I	A	V	G	H	Q	H	H	L	N	V	V	G	W	N	P	.	G	P	A	L	S	I	S	M	G	D	M	P	D	D	G	Y	K	T	F	V	C	V	E	T	A	Y	A	S	E	T	Q	.	.	.	.	.	.
Query Conservation		.	.	.																																								.																																.	.	.	.	.	.
Alig confidence		.	.	.																														.										.															.	.	.															.	.	.	.	.	.
Template Conservation																																		.																									.	.	.
Template Sequence		L	R	N	G	L	D	H	P	F	I	L	N	G	N	N	P	A	A	L	L	S	S	N	K	H	R	L	I	V	K	T	N	.	A	P	A	L	V	L	Y	A	G	N	H	F	N	H	T	G	I	V	N	N	I	G	Q	Y	.	.	.	D	G	I	T	F	E	A	Q	C	P	P	A	E	G	N	D	L	G	Q	I
Template Known Secondary structure				T	S									S		S		S						S	S								S	.	S	S								T	T			S		G	G	G	T	T			T	T	.	.	.	S								S				S	S	S	B		G	G	G
Template Predicted Secondary structure																																		.																									.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	T	K	E	K	P	A	H	L	A	Q	S	I	R	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	L	P	F	E	K	F	K	R	T	V	D	W	K	F	E
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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