Job Description P39173 Confidence 96.65% Date Thu Jan 5 11:58:21 GMT 2012 Rank 19 Aligned Residues 129 % Identity 11% Template c3bs6B_ PDB info PDB header:membrane protein, protein transport Chain: B: PDB Molecule:inner membrane protein oxaa; PDBTitle: 1.8 angstrom crystal structure of the periplasmic domain of2 the membrane insertase yidc Resolution 1.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		D	E	L	D	L	I	V	V	D	H	P	Q	V	K	A	S	F	A	L	Q	G	A	H	L	L	S	W	K	P	A	G	E	E	E	V	L	W	L	S	N	N	T	P	F	K	N	G	V	A	I	R	G	G	V	P	V	C	W	P	W	F	G	P	A	.	A	Q	Q	G	L	P	A	H	G	F	A	R	N	L	P
Query Conservation																																																																		.
Alig confidence																																																			.															.
Template Conservation																																																			.
Template Sequence		G	Q	G	K	L	I	S	V	K	T	D	V	L	D	L	T	I	N	T	R	G	G	D	V	E	Q	A	L	L	P	A	Y	P	K	E	L	N	S	T	Q	P	F	Q	L	L	E	T	S	P	.	Q	F	I	Y	Q	A	Q	S	G	L	T	G	R	D	G	P	D	N	P	A	N	G	P	R	P	L	Y	N	V	E
Template Known Secondary structure												S	S							T	B	T	T												S	S	T	T			S					S				T	.	T											S	T	T		T	T	S	G	G	G	S	S			B		B		S
Template Predicted Secondary structure																																																			.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																											.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.
Query Sequence		W	T	L	K	S	H	H	E	D	A	D	G	V	A	L	T	F	E	L	T	Q	S	E	E	T	K	K	F	W	P	H	D	F	T	L	L	A	H	F	R	V	.	.	.	.	.	.	.	G	K	T	C	E	I	D	L	E	S	H	G	E	F	E	T	T	S
Query Conservation																																											.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.
Template Sequence		K	D	A	Y	V	L	A	E	G	Q	N	E	L	Q	V	P	X	T	Y	T	D	.	.	.	.	.	.	.	.	A	A	G	N	T	F	T	K	T	F	V	L	K	R	G	D	Y	A	V	N	V	N	Y	N	V	Q	N	A	G	E	K	P	L	E	I	S	S
Template Known Secondary structure			S						T	T		S											.	.	.	.	.	.	.	.	T	T												T	T														S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.									.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions