Job Description P39173 Confidence 3.29% Date Thu Jan 5 11:58:21 GMT 2012 Rank 77 Aligned Residues 42 % Identity 21% Template c2r5kE_ PDB info PDB header:viral protein Chain: E: PDB Molecule:major capsid protein l1; PDBTitle: pentamer structure of major capsid protein l1 of human2 papilloma virus type 11 Resolution 3.20 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																			.						.	.	.
Query SS confidence																			.						.	.	.
Query Sequence		H	T	Y	F	N	V	G	D	I	A	K	V	S	V	S	G	L	.	G	D	R	F	I	.	.	.	D	K	V	N	D	A	K	E	N	V	L	T	D	G	I	Q	T	F	P	D
Query Conservation																			.						.	.	.
Alig confidence																			.						.	.	.
Template Conservation
Template Sequence		H	P	Y	Y	S	I	K	K	V	N	K	T	V	V	P	K	V	S	G	Y	Q	Y	R	V	F	K	V	V	L	P	D	P	N	K	F	A	L	P	D	S	S	L	F	D	P	T
Template Known Secondary structure		B	S	S	S					S	S	S					B			T	T	B											T	T	T				S				S			T	T
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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