Job Description P50456 Confidence 81.55% Date Thu Jan 5 12:04:43 GMT 2012 Rank 485 Aligned Residues 71 % Identity 13% Template d2esha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40										.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.
Query Sequence		G	H	I	D	Q	I	K	Q	T	N	A	G	A	V	Y	R	L	I	D	Q	L	G	P	V	S	R	I	D	L	S	R	L	A	.	.	.	.	.	.	.	.	.	Q	L	A	P	A	S	I	T	K	I	V	R	E	M	L	E	A	H	L	V	Q	E	L	E	I	K	E	A	G	N	R	G	R	P	A	V	G	L
Query Conservation																																			.	.	.	.	.	.	.	.	.
Alig confidence																						.													.	.	.	.	.	.	.	.	.																									.	.				.
Template Conservation																						.																																														.	.				.
Template Sequence		G	G	R	G	F	R	G	W	W	L	A	S	T	I	L	L	L	V	A	E	.	K	P	S	H	G	Y	E	L	A	E	R	L	A	E	F	G	I	E	I	P	G	I	G	H	M	G	N	I	Y	R	V	L	A	D	L	E	E	S	G	F	L	S	T	E	W	.	.	D	T	T	.	V	S	P	P	R	K	I	Y
Template Known Secondary structure																						.	S		B											T	T			S	S	T	T																	T	T	S						.	.			S	.	S	S	S
Template Predicted Secondary structure																						.																																														.	.				.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.		.	.	.	.	.	.	.	80
		79	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	T	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions