 |
Job Description | P50456 | Confidence | 97.37% | Date | Thu Jan 5 12:04:43 GMT 2012 |
Rank | 152 | Aligned Residues | 61 |
% Identity | 10% | Template | d1z91a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
|
Resolution | 2.50 |
|
 |
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | A | V | Y | R | L | I | D | Q | L | G | P | V | S | R | I | D | L | S | R | L | A | Q | L | A | P | A | S | I | T | K | I | V | R | E | M | L | E | A | H | L | V | Q | E | L | E | I | K | E | A | G | N | R | G | R | P | A | V | G | L | V | V | E | T |
Query Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |
| . | . | . | . |   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |
|
|   |
Template Sequence |   |
Q | Y | L | A | L | L | L | L | W | E | H | E | T | L | T | V | K | K | M | G | E | Q | L | Y | L | D | S | G | T | L | T | P | M | L | K | R | M | E | Q | Q | G | L | I | . |
. |
. |
. |
T | R | K | R | S | E | E | D | E | R | S | V | L | I | S | L | T | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  | . | . | . | . |  |
|
| B |
| S | S |
| T | T | S | B |  |  |  |  |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
|
|
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|