Return to main results Retrieve Phyre Job Id

Job DescriptionP50456
Confidence92.65%DateThu Jan 5 12:04:43 GMT 2012
Rank320Aligned Residues47
% Identity13%Templated1ylfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60....
Predicted Secondary structure 











Query SS confidence 














































Query Sequence  AGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLVQELE
Query Conservation     

  
      

 


    

  


 

  
   


 
  
Alig confidence 














































Template Conservation    
  

       

  

    
    
 


  
   


 
 
Template Sequence  HILSILKNNPSSLCTSDYXAESVNTNPVVIRKIXSYLKQAGFVYVNG
Template Known Secondary structure  S
GGG

TS
TTS

Template Predicted Secondary structure 















Template SS confidence 














































   15....20.........30.........40.........50.........60.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions