Return to main results Retrieve Phyre Job Id

Job DescriptionP50456
Confidence97.81%DateThu Jan 5 12:04:43 GMT 2012
Rank92Aligned Residues165
% Identity18%Templated1v4sa2
SCOP infoRibonuclease H-like motif Actin-like ATPase domain Hexokinase
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   213......220.........230.........240.........250.........260.... ..
Predicted Secondary structure 







































..........................
Query SS confidence 



















































. . . . . . . . . . . . . . . . . . . . . . . . . .

Query Sequence  RDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNHGC. . . . . . . . . . . . . . . . . . . . . . . . . . LE
Query Conservation       
  
 


 
 
  
    
    





      
  
 

  

..........................

Alig confidence 






























...






.....





..........................

Template Conservation   
 












 
    
 
      ... 



 
.....

 

         
  
  

  
 


 
 

Template Sequence  QCEVGMIVGTGCNACYMEEMQNVELVEGDEG. . . RMCVNTE. . . . . WGAFGDSGELDEFLLEYDRLVDESSANPGQQLYE
Template Known Secondary structure 
SSSGGG
TTSS

SS...

.....GGGTTTTSTTTTT

TSSSTTS
Template Predicted Secondary structure 














...


.....





















Template SS confidence 















































































   219220.........230.........240......... 250...... ...260.........270.........280.........290
 
   267..270.........280..... ....290.........300......... 310
Predicted Secondary structure 



...........













.........................
Query SS confidence 


















. . . . . . . . . . .























. . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  TIASVDSILELAQLRLNQS. . . . . . . . . . . MSSMLHGQPLTVDSLCQAALRGDL. . . . . . . . . . . . . . . . . . . . . . . . . L
Query Conservation     
  

           ...........              
   
  

 ......................... 
Alig confidence 


















...........























.........................
Template Conservation 




 






 

  
     

       
     
 
  

 
  
          
          
   

 
Template Sequence  KLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRKQIYNILSTLGLRPSTTDCDIVRRA
Template Known Secondary structure 
TTTTT
SGGG


TGGGSTT
S
TT

SSSTT



Template Predicted Secondary structure 






























Template SS confidence 















































































   291........300.........310.........320.........330.........340.........350.........360.........370
 
   311........320.........330...... ...340.........350.........360.........370.........380..
Predicted Secondary structure 


........












Query SS confidence 

























. . . . . . . .













































Query Sequence  AKDIITGVGAHVGRILAIMVNLFNPQ. . . . . . . . KILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQG
Query Conservation 
  

      
   
 

   


 ........ 




            
   
             
  
      
Alig confidence 

























........


























...










...

Template Conservation     
  


 
 

 



              
 
  


     
 
   
   
  
 ...    
 
    ...

Template Sequence  CESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSFKERFHASVRRLT. . . PSCEITFIESE. . . EG
Template Known Secondary structure  TT

SSS
STT
...TT
S...S
Template Predicted Secondary structure 











...




...

Template SS confidence 















































































   371........380.........390.........400.........410.........420.........430. ........440.. ..
 
   383......390.
Predicted Secondary structure 
Query SS confidence 








Query Sequence  TMAGAALVK
Query Conservation     




 
Alig confidence 








Template Conservation 

 



 
Template Sequence  SGRGAALVS
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 








   445....450...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions