Job Description P50456 Confidence 99.68% Date Thu Jan 5 12:04:43 GMT 2012 Rank 39 Aligned Residues 248 % Identity 13% Template d1huxa_ SCOP info Ribonuclease H-like motif Actin-like ATPase domain BadF/BadG/BcrA/BcrD-like Resolution 3.00

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	L	S	L	R	I	S	R	G	E	I	F	L	A	L	R	D	L	S	S	K	L	V	V	E	E	S	Q	E	L	A	L	K	D	D	L	P	L	L	D	R	I	I	S	H	I	D	Q	F	F	I	R	H	Q	K	K	L	E	R	L	T	S	I	A	I	T	L	P	G	I	I	D	T	E	N	G	I	V	H
Query Conservation
Alig confidence																																				.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	L	G	I	D	V	G	S	T	A	S	K	C	I	I	L	K	D	G	K	E	I	V	A	K	S	L	V	A	V	G	T	G	.	.	.	.	.	T	S	G	P	A	R	S	I	S	E	V	L	E	N	A	H	M	K	K	E	D	M	A	F	T	L	A	T	G	Y	G	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	S									T	T	T												S	S	.	.	.	.	.																T			G	G	G		S						S	T	T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	P	F	Y	E	D	V	K	E	M	P	L	G	E	A	L	E	Q	H	T	G	V	P	V	Y	I	Q	H	D	I	S	A	W	T	M	A	E	A	L	F	G	A	S	R	G	A	R	D	V	I	Q	V	V	I	D	H	N	V	G	A	G	V	I	T	D	G	H	L	L	H	A	G	S	S	S	L	V	E	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.																														.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.																														.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	S	L	E	G	I	A	D	K	Q	M	S	E	L	S	C	H	A	M	G	A	S	F	I	W	P	N	.	.	.	V	H	T	V	I	D	I	G	G	Q	D	V	K	V	I	H	V	E	N	G	T	M	T	N	F	Q	M	N	D	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T	T	T		S																		T	T	.	.	.									T	T									T	T									S	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.																														.	.	.	.
Template SS confidence
																		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		G	H	T	Q	V	D	P	Y	G	K	R	C	Y	C	G	N	H	G	C	L	E	T	I	A	S	V	D	S	I	.	.	.	.	L	E	L	A	Q	L	R	L	N	Q	S	M	S	S	M	L	H	G	Q	P	L	T	V	D	S	L	C	Q	A	A	L	R	G	D	L	L	A	K	D	I	I	T	G	V	G	A	H
Query Conservation																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																				.	.	.	.																																						.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																																													.
Template Sequence		.	.	.	.	.	.	.	.	.	.	K	C	A	A	G	T	G	R	F	L	D	V	M	A	N	I	L	E	V	K	V	S	D	L	A	E	L	G	A	K	S	T	K	R	V	A	I	S	S	T	C	T	V	F	A	E	S	E	V	I	S	Q	L	S	K	G	T	D	K	I	.	D	I	I	A	G	I	H	R	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S			T	T	S												T			T	T	T						T	T			S								S														T	T					.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																													.
Template SS confidence
												126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		V	G	R	I	L	A	I	M	V	N	L	F	N	P	.	Q	K	I	L	I	G	S	P	L	S	K	A	A	D	I	L	F	P	V	I	S	D	S	I	R	Q	Q	A	L	P	A	Y	S	Q	H	I	S	V	E	S	T	Q	F	S	N	Q	G	T	M	A	G	A	A	L	V	K	D	A
Query Conservation																.
Alig confidence																.													.												.	.	.	.	.	.	.	.	.	.
Template Conservation																													.												.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	S	R	V	I	G	L	A	N	R	V	G	I	V	K	D	V	V	M	T	G	G	V	A	Q	N	.	Y	G	V	R	G	A	L	E	E	G	L	.	.	.	.	.	.	.	.	.	.	G	V	E	I	K	T	S	P	L	A	Q	Y	N	G	A	L	G	A	A	L	Y	A	Y	K
Template Known Secondary structure												T	T				S	S					S	G	G	G	G		.												.	.	.	.	.	.	.	.	.	.		S						G	G	G	G	G
Template Predicted Secondary structure																													.												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.											.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions