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Job DescriptionP50456
Confidence100.00%DateThu Jan 5 12:04:43 GMT 2012
Rank6Aligned Residues302
% Identity25%Templatec3vgkB_
PDB info PDB header:transferaseChain: B: PDB Molecule:glucokinase; PDBTitle: crystal structure of a rok family glucokinase from streptomyces2 griseus
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  WHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIV
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Template Sequence  GLTIGVDIGGTKIAAGVVDEEGRILSTFKVATPP. TAEGIVDAICAAVAGASEGH. . . . . DVEAVGIGAAGYVDDKRATV
Template Known Secondary structure 
TT
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   2.......10.........20.........30..... ....40.........50..... ....60.........70.....
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  HRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVE
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Template Sequence  LFAPNID. WRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAE
Template Known Secondary structure 
SSS
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   76...80.. .......90.........100.........110.........120.........130.........140.........150....
 
   245....250.........260.........270.........280.........290 .........300.........310......
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Query Sequence  IGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSML. . . . . . . . HGQPLTVDSLCQAALRGDLLAKDIIT
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Template Sequence  FGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFR
Template Known Secondary structure  GGGSB
STT
SB
TTSSB
BGGGTSS
GGG
SSSSTT


TTT
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   155....160.........170.........180.........190.........200.........210.........220.........230....
 
   317..320.........330.........340.........350.........360.... .....370.........380.........390...
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Query Sequence  GVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIRQQAL. PAYSQHISVESTQFSNQGTMAGAALVKDA
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Template Sequence  ELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQ
Template Known Secondary structure 

SSTTGGGT
SSTTTS



SSGGGTT
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   235....240.........250.........260.........270.........280.........290.........300.........310..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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