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Job DescriptionP50456
Confidence99.63%DateThu Jan 5 12:04:43 GMT 2012
Rank44Aligned Residues335
% Identity18%Templatec3hm8D_
PDB info PDB header:transferaseChain: D: PDB Molecule:hexokinase-3; PDBTitle: crystal structure of the c-terminal hexokinase domain of human hk3
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80. ........90.........100.......
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Query Sequence  IDLSRLAQLAPASITKIVREMLEAHLVQELEIKEAGNRGRPAVGLVVE. . . . . . TEAWHYLSLRISRGEIFLALRDLSSK
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Template Sequence  EETLAPFRLNHDQLAAVQAQMRKA. . . . . MAKGLRGEASSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG
Template Known Secondary structure  GGGS

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   484.....490.........500....... ..510.........520.........530.........540.........550........
 
   108.110... .... ..120.........130.........140... ......150......... 160........ .170.......
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Query Sequence  LVVEES. QELA. . . . LKDDLPLLDRIISHIDQFFIRHQKKL. ERLTSIAITLPGIIDT. ENGIVHRMP. . . FYEDVKEMP
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Template Sequence  VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLSGQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKASDCEGQD
Template Known Secondary structure 


SSBT
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TT


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TTSB
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   559560.........570.........580.........590.........600.........610.........620.........630........
 
   178.180......... 190.........200.........210.........220.........230.........240.........250
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Query Sequence  LGEALEQHTGVP. . . . . . . VYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQV
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Template Sequence  VVSLLREAITRRQAVELNVVAIVNDTVGTMMSCG. . . . YEDPRCEIGLIVGTGTNACYMEELRNVAGVPGDS. . . GRMCI
Template Known Secondary structure  T
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S
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TTSSSGGG
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   639640.........650.........660.........670.. .......680.........690.........700...... ...710.
 
   251........260... ......270.........280..... ....290.......
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Query Sequence  DPYGKRCYCGNHG. . . . . . . . . . . . . . . . . . . . . . . . . . CLETIASVDSILELAQLRLNQS. . . . . . . MSSMLHGQPLTV
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Template Sequence  . . . . . NMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFIQRLQTRDIFKT
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GGGTTTTTTTTTT

TSSSTTSSTTGGGTSTS


GGGGSTT
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   712.......720.........730.........740.........750.........760.........770.........780......
 
   298.300.........310 .........320.........330...... ...340....
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Query Sequence  DSLCQAALRGDLL. . . . . . . . . . . . . . . . . . . . . . . . . AKDIITGVGAHVGRILAIMVNLFNPQ. . . . . . . . KILIGSPL
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Template Sequence  KFLSEIESDSLALRQVRAILEDLGLPLTSDDALMVLEVCQAVSQRAAQLCGAGVAAVVEKIRENRGLEELAVSVGVDGTL
Template Known Secondary structure  T
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TTT



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   791........800.........810.........820.........830.........840.........850.........860.........870
 
   345....350.........360.........370.........380.........390.
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Query Sequence  SKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVK
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Template Sequence  YKLHPRFSSLVAATVRELA. . . PRCVVTFLQSE. . . DGSGKGAALVT
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TT
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   871........880......... 890.........900 .........910.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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