Return to main results Retrieve Phyre Job Id

Job DescriptionP50456
Confidence94.48%DateThu Jan 5 12:04:43 GMT 2012
Rank283Aligned Residues68
% Identity9%Templatec3hhhA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, padr family; PDBTitle: crystal structure of transcriptional regulator, a member of padr2 family, from enterococcus faecalis v583
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40. ........50.........60.........70.........80..
Predicted Secondary structure 





......


















Query SS confidence 






























. . . . . .








































Query Sequence  DQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQ. . . . . . LAPASITKIVREMLEAHLVQELEIKEAGNRGRPAVGLVVET
Query Conservation    

  
   

  
      

 


    ......

  


 

  
   


 
         

    
  
 
Alig confidence 






























......























....












Template Conservation       
 
   

  
      

 
   
       

 
 

  
 


  
 
     ....     

 
 

 
Template Sequence  TELLKGILEGLVLAIIQRKETYGYEITKILNDQGFTEIVEGTVYTILLRLEKNQWVIAEKK. . . . PSEPXRKFYRLTS
Template Known Secondary structure  TTS
B
TTS
SS

TTS....



Template Predicted Secondary structure 
















....





Template SS confidence 













































































   4.....10.........20.........30.........40.........50.........60.... .....70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions