Return to main results Retrieve Phyre Job Id

Job DescriptionP50456
Confidence98.37%DateThu Jan 5 12:04:43 GMT 2012
Rank74Aligned Residues109
% Identity16%Templatec3gg4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:glycerol kinase; PDBTitle: the crystal structure of glycerol kinase from yersinia2 pseudotuberculosis
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   86...90.........100.........110......... 120.........130.........140.........150......
Predicted Secondary structure 










.........








Query SS confidence 

































. . . . . . . . .




































Query Sequence  HYLSLRISRGEIFLALRDLSSKLVVEESQELALK. . . . . . . . . DDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGI
Query Conservation    


 

       
 

 
 

          .........     
  
   
             
 




  
 
Alig confidence 

































.........



































.
Template Conservation 
 



 



 

 
 
  
  
              
  


           
             
 

 

   .
Template Sequence  YFIGVDVGTGSARAGVFDLQGRXVGQASREITXFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQVKGLGFDATC.
Template Known Secondary structure 
SS
TT




B
SSTT


T

GGG
S.
Template Predicted Secondary structure 






























.
Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80..
 
   157..160.........170.........180.........190.........200.....
Predicted Secondary structure 





















Query SS confidence 
















































Query Sequence  IDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEAL
Query Conservation 

   
 
                        

 
 

  
 
 

  
Alig confidence  ..........






































Template Conservation  ..........  
 

  
  
            
 
 
 
       
Template Sequence  . . . . . . . . . . SLVVLDKEGNPLTVSPSGRNEQNVIVWXDHRAITQAERI
Template Known Secondary structure  ..........
TTS
B


STT

TT


TT

TT
Template Predicted Secondary structure  ..........


















Template SS confidence 
















































   83......90.........100.........110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions