 |
Job Description | P50456 | Confidence | 97.54% | Date | Thu Jan 5 12:04:43 GMT 2012 |
Rank | 127 | Aligned Residues | 62 |
% Identity | 19% | Template | c2gxgA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:146aa long hypothetical transcriptional regulator; |
PDBTitle: crystal structure of emrr homolog from hyperthermophilic archaea2 sulfolobus tokodaii strain7
|
Resolution | 1.45 Å |
|
 |
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | N | A | G | A | V | Y | R | L | I | D | Q | L | G | P | V | S | R | I | D | L | S | R | L | A | Q | L | A | P | A | S | I | T | K | I | V | R | E | M | L | E | A | H | L | V | Q | E | L | E | I | K | E | A | G | N | R | G | R | P | A | V | G | L | V | V | E | T |
Query Conservation |   |
  |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |
| . |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |
|
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |
|   |
|   | . | . | . | . |   |   |   |   |
|   |
|   |   |   |
|   |
|
|   |
Template Sequence |   |
Y | L | D | F | L | V | L | R | A | T | . |
S | D | G | P | K | T | M | A | Y | L | A | N | R | Y | F | V | T | Q | S | A | I | T | A | S | V | D | K | L | E | E | M | G | L | V | V | R | V | . |
. |
. |
. |
R | D | R | E | D | R | R | K | I | L | I | E | I | T | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . | T | T | S |
| B |
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | . | . | . | . |  |
| S | S |
| T | T |
|  |  |  |  |  |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | |
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
|
|
. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|