Job Description P50456 Confidence 100.00% Date Thu Jan 5 12:04:43 GMT 2012 Rank 19 Aligned Residues 297 % Identity 13% Template c2ch5D_ PDB info PDB header:transferase Chain: D: PDB Molecule:nagk protein; PDBTitle: crystal structure of human n-acetylglucosamine kinase in2 complex with n-acetylglucosamine Resolution 1.9 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.																										.
Query SS confidence																																						.	.	.																										.
Query Sequence		A	W	H	Y	L	S	L	R	I	S	R	G	E	I	F	L	A	L	R	D	L	S	S	K	L	V	V	E	E	S	Q	E	L	A	L	K	.	.	.	D	D	L	P	L	L	D	R	I	I	S	H	I	D	Q	F	F	I	R	H	Q	K	K	L	E	.	R	L	T	S	I	A	I	T	L	P	G	I	I	D	T
Query Conservation																																						.	.	.																										.
Alig confidence																																						.	.	.																										.
Template Conservation
Template Sequence		A	A	I	Y	G	G	V	E	G	G	G	T	R	S	E	V	L	L	V	S	E	D	G	K	I	L	A	E	A	D	G	L	S	T	N	H	W	L	I	G	T	D	K	C	V	E	R	I	N	E	M	V	N	R	A	K	R	K	A	G	V	D	P	L	V	P	L	R	S	L	G	L	S	L	S	G	G	D	Q	E
Template Known Secondary structure		S										T	T									T	T	S																																					T			T	T			B	S							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		E	N	G	I	V	H	R	M	P	F	Y	E	D	V	K	E	M	P	L	G	E	A	L	E	Q	H	T	G	V	P	V	Y	I	Q	H	D	I	S	A	W	T	M	A	E	A	L	F	G	A	S	R	G	A	R	D	.	.	V	I	Q	V	V	I	D	H	N	V	G	A	G	V	I	T	D	G	H	L	L	H	A
Query Conservation																																																									.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	G	R	I	L	I	E	E	L	R	D	R	F	P	Y	.	.	.	.	.	.	.	.	.	.	L	S	E	S	Y	L	I	T	T	D	A	A	G	S	I	A	T	A	T	P	D	G	G	V	V	L	I	S	G	T	G	S	N	C	R	L	I	N	P	D	G	S	E	S	G	C	G	G	W	G	H	M	M	G
Template Known Secondary structure																T	T	.	.	.	.	.	.	.	.	.	.	S	B	S																	S	S								S	S	S								T	T	S										T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.											.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.											.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	S	S	L	V	E	I	G	H	T	Q	V	D	P	Y	G	K	R	C	Y	C	G	N	H	G	C	L	E	T	I	A	S	V	D	S	I	L	E	L	A	Q	L	R	L	N	Q	S	M	S	S	M	L	H	G	Q	.	.	.	.	.	.	.	.	.	.	P	L	T	V	D	S	L	C	Q	A	A	L	R	G
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		D	E	G	S	A	Y	W	I	A	H	Q	A	V	.	.	.	.	K	I	V	F	D	S	I	D	N	L	E	A	A	P	H	D	I	G	Y	V	K	Q	A	M	F	H	Y	F	Q	V	P	D	R	L	G	I	L	T	H	L	Y	R	D	F	D	K	C	R	F	A	G	F	C	R	K	I	A	E	G	A	Q	Q	G
Template Known Secondary structure			T	T	S										.	.	.	.									T	S	S			S	S														T		S	S									T	T	T								T	T										T	T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.									.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.
Query Sequence		D	L	L	A	K	D	I	I	T	G	V	G	A	H	V	G	R	I	L	A	I	M	V	N	L	F	N	P	Q	K	.	.	.	.	.	.	.	.	I	L	I	G	S	P	L	S	K	A	A	D	I	L	F	P	V	I	S	D	S	I	R	Q	Q	A	L	P	A	Y	S	Q	H	I	S	V	E	S	T	Q	F	S
Query Conservation																																.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.
Template Sequence		D	P	L	S	R	Y	I	F	R	K	A	G	E	M	L	G	R	H	I	V	A	V	L	P	E	I	D	P	V	L	F	Q	G	K	I	G	L	P	I	L	C	V	G	S	V	W	K	S	W	E	L	L	K	E	G	F	L	L	A	L	T	Q	G	.	.	.	.	.	R	E	I	F	S	S	F	T	L	M	K	L
Template Known Secondary structure																								G	G	G	S		G	G	G	G		S	S	S								S	G	G	G	G	G																.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.	.	300	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	G	T	M	A	G	A	A	L	V	K	D	A	M	Y	N	G	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	H	S	S	A	L	G	G	A	S	L	G	A	R	H	I	G	H	L	L
Template Known Secondary structure		S	S		T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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