Job Description P50456 Confidence 99.38% Date Thu Jan 5 12:04:43 GMT 2012 Rank 48 Aligned Residues 234 % Identity 10% Template c1zbsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pg1100; PDBTitle: crystal structure of the putative n-acetylglucosamine kinase (pg1100)2 from porphyromonas gingivalis, northeast structural genomics target3 pgr18 Resolution 2.30 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	S	L	R	I	S	R	G	E	I	F	L	A	L	R	D	L	S	S	K	L	V	V	E	E	S	Q	E	L	A	L	K	D	D	L	P	L	L	D	R	I	I	S	H	I	D	Q	F	F	I	R	H	Q	K	K	L	E	R	L	T	S	I	A	I	T	L	P	G	I	I	D	T	E	N	G	I	V	H	R
Query Conservation
Alig confidence																			.																																																										.	.	.	.	.
Template Conservation																			.																																																										.	.	.	.	.
Template Sequence		I	L	I	G	D	S	G	S	T	K	T	D	W	C	I	A	K	.	E	G	K	S	L	G	R	F	Q	T	S	G	I	N	P	F	Q	Q	D	R	N	E	I	D	T	A	L	R	S	E	V	L	P	A	I	G	Q	K	A	S	S	I	R	A	V	Y	F	Y	G	A	G	C	T	P	A	K	A	.	.	.	.	.
Template Known Secondary structure									S	S									.	T	T													T	T	T	S										T	T	T	T					T	T	S	T	T	T									T	T			T	T	T		.	.	.	.	.
Template Predicted Secondary structure																			.																																																										.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		M	P	F	Y	E	D	V	K	E	M	P	L	G	E	A	L	E	Q	H	T	G	.	.	V	P	V	Y	I	Q	H	D	I	S	A	W	T	M	A	E	A	L	F	G	A	S	R	G	A	R	D	V	I	Q	V	V	I	D	H	N	V	G	A	G	V	I	T	D	G	H	L	L	H	A	G	S	S	S	L	V	E
Query Conservation																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.													.	.																.	.	.	.	.	.																															.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.																															.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	P	X	L	N	E	A	L	D	S	X	L	P	H	C	D	R	I	E	V	A	G	D	X	L	G	A	A	R	A	.	.	.	.	.	.	L	C	G	D	S	E	G	I	A	C	I	L	G	T	G	S	N	S	C	L	F	D	G	R	E	I	K	A	N	V	.	.	.	.	S	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.											S	T	T		S															.	.	.	.	.	.		T	T	T	S								S	S	S								S	S	S						.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.																															.	.	.	.
Template SS confidence
											76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.																				.	.
Predicted Secondary structure																																																			.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	H	T	Q	V	D	P	Y	G	K	R	C	Y	C	G	N	H	G	C	L	E	T	I	A	S	V	D	S	I	L	E	L	A	Q	L	R	L	N	Q	S	M	S	S	M	L	H	G	Q	.	P	L	T	V	D	S	L	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A
Query Conservation																																																			.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																												.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	Y	I	L	G	D	E	G	S	G	.	.	.	.	.	.	.	.	.	.	.	A	V	L	G	R	L	F	I	G	S	L	L	K	G	Q	X	P	E	G	L	C	E	A	F	L	Q	E	Y	G	L	T	S	A	D	I	I	E	S	V	Y	R	K	P	F	P	N	R	F	L	A	G	F	S	P	F	I	A	Q
Template Known Secondary structure									T	T	S		.	.	.	.	.	.	.	.	.	.	.													T	T		S		T	T									T	T													S	S								T	T						T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.												.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		L	R	G	D	L	L	A	K	D	I	I	T	G	V	G	A	H	V	G	R	I	L	A	I	M	V	N	L	F	N	P	Q	K	.	I	L	I	G	S	P	L	S	K	A	A	D	I	L	F	P	V	I	S	D	S
Query Conservation																																			.
Alig confidence																				.	.														.
Template Conservation																				.	.
Template Sequence		H	L	D	I	P	A	V	Y	S	L	V	Q	N	S	F	D	D	F	.	.	L	V	R	N	V	L	R	Y	N	R	P	D	L	P	L	H	F	I	G	S	V	A	F	H	Y	R	E	V	L	S	S	V	I	K	K
Template Known Secondary structure		T	T	T	S															.	.					T	G	G	G			T	T	S						S						T
Template Predicted Secondary structure																				.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions