Job Description P0AE76 Confidence 94.79% Date Thu Jan 5 11:22:43 GMT 2012 Rank 67 Aligned Residues 150 % Identity 13% Template c3ld9D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase from ehrlichia chaffeensis at2 2.15a resolution Resolution 2.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																																										.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																																										.	.	.	.	.	.	.
Query Sequence		M	M	I	L	V	T	G	G	A	R	S	G	K	S	R	H	A	E	A	L	I	.	.	.	.	G	D	S	S	Q	V	L	Y	I	A	T	S	Q	I	L	D	D	E	M	A	A	R	I	E	H	H	R	Q	G	R	P	E	H	W	R	T	V	E	R	W	Q	.	.	.	.	.	.	.	H	L	D	E	L	I	H
Query Conservation																							.	.	.	.																																										.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	F	I	T	F	E	G	I	D	G	S	G	K	T	T	Q	S	H	L	L	A	E	Y	L	S	E	I	Y	G	V	N	N	V	V	L	T	R	E	P	G	G	T	L	L	N	E	S	V	R	N	L	L	F	K	A	Q	G	L	D	S	L	S	E	L	L	F	F	I	A	M	R	R	E	H	F	V	K	I	I	K
Template Known Secondary structure									S	T	T	S	S																		G	G	G						S	S		S	S													S																							T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	I	N	P	N	E	V	V	L	L	E	C	V	T	T	M	V	T	N	L	L	F	D	Y	G	G	D	K	D	P	D	E	W	D	Y	Q	A	M	E	Q	A	I	N	A	E	I	Q	S	L	I	A	A	C	Q	R	C	P	A	K	V	V	L	V	T	N	E	V	G	M	G	I	V	P	E	S	R	L	A	R
Query Conservation
Alig confidence															.	.																			.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.																			.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	L	M	Q	K	K	I	V	I	C	D	R	.	.	F	I	D	S	T	I	A	Y	Q	G	Y	G	Q	G	I	D	C	S	.	.	.	.	.	.	.	.	.	.	.	.	L	I	D	Q	L	N	D	L	V	I	D	V	Y	P	D	I	T	F	I	I	D	V	.	.	.	.	.	.	.	.	.	.	D	D	M
Template Known Secondary structure						T	T							S	.	.										T	T	T	T						.	.	.	.	.	.	.	.	.	.	.	.											S				S								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.																			.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.													.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.											.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	R	D	I	A	G	R	V	N	Q	Q	L	A	A	A	A	N	E	V	W	L	V	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	Y	Y	R	V	R	D	G	F	Y	D	I	A	K	K	N	P	H	R	C	H	V	I	T
Template Known Secondary structure																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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