Job Description P0AE76 Confidence 68.38% Date Thu Jan 5 11:22:43 GMT 2012 Rank 312 Aligned Residues 112 % Identity 10% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.						.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.											.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Query Sequence		M	M	I	L	V	T	G	G	A	R	S	G	K	S	R	.	.	.	.	.	H	A	E	A	L	I	G	D	S	S	Q	V	L	Y	I	A	T	S	Q	I	L	D	D	E	M	A	A	R	I	E	.	.	.	.	.	.	.	.	.	.	H	H	R	Q	G	R	P	E	H	W	R	T	V	E	R	W	Q	H	L	D
Query Conservation																	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	T	I	M	D	L	H	P	G	A	G	K	T	K	R	I	L	P	S	I	V	R	E	A	L	K	R	R	L	R	T	L	I	L	A	P	T	R	V	V	A	A	E	M	E	E	A	L	R	G	L	P	I	R	Y	Q	T	P	A	V	K	S	D	H	T	G	R	E	I	V	D	L	M	C	H	A	T	F	T
Template Known Secondary structure										T	T	T			T	T	T												T	T								S	S											T	T	T	S							T	T		S						S	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		E	L	I	H	A	D	I	N	P	N	.	.	E	V	V	L	L	E	C	V	T	T	M	V	T	N	L	L	F	D	Y	G	G	D	K	D	P	D	E	W	D	Y	Q	A	M	E	Q	A	I	N	A	E	I	Q	S	L	I	A	A	C	Q	R	C	P	A	K	V	V	L	V	T
Query Conservation												.	.
Alig confidence												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	L	L	S	S	T	R	V	P	N	Y	N	L	I	V	M	D	E	A	H	F	T	D	P	C	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	R	G	Y	I	S	T	R	V	E	M	G	E	A	A	A	I	F	M	T
Template Known Secondary structure								S						S						S	T	T			S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.																							.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions