Job Description P0AE76 Confidence 79.47% Date Thu Jan 5 11:22:43 GMT 2012 Rank 260 Aligned Residues 79 % Identity 15% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																						.	.	.																																											.	.	.	.	.
Query SS confidence																						.	.	.																																											.	.	.	.	.
Query Sequence		M	I	L	V	T	G	G	A	R	S	G	K	S	R	H	A	E	A	L	I	.	.	.	G	D	S	S	Q	V	L	Y	I	A	T	S	Q	I	L	D	D	E	M	A	A	R	I	E	H	H	R	Q	G	R	P	E	H	W	R	T	V	E	R	W	Q	H	.	.	.	.	.	L	D	E	L	I	H	A	D	I	N
Query Conservation																						.	.	.																																											.	.	.	.	.
Alig confidence																						.	.	.																																											.	.	.	.	.								.
Template Conservation																																																																															.
Template Sequence		V	I	L	L	V	G	I	Q	G	S	G	K	T	T	T	A	A	K	L	A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	A	A	D	T	Y	R	P	A	A	Y	E	Q	L	K	Q	L	A	E	K	I	H	V	P	I	Y	G	D	E	T	R	T	K	S	P	V	D	I	V	K	E	G	M	E	K	.	F	K
Template Known Secondary structure									S	S	S	S	T	T																							S				T	T	G	G	G	S	S							S	S							S	S	S			S	S	S	T	T							T	.	T	S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180
		74	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	E	V	V	L	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	D	V	L	I	I	D
Template Known Secondary structure		S		S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions