Job Description P0AE76 Confidence 89.09% Date Thu Jan 5 11:22:43 GMT 2012 Rank 176 Aligned Residues 111 % Identity 12% Template c2qmoA_ PDB info PDB header:ligase Chain: A: PDB Molecule:dethiobiotin synthetase; PDBTitle: crystal structure of dethiobiotin synthetase (biod) from helicobacter2 pylori Resolution 1.47 Å

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		2	.	.	.	.	.		.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.									.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure								.								.	.	.	.																		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Query SS confidence								.								.	.	.	.																		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	L	V	T	G	.	G	A	R	S	G	K	S	.	.	.	.	R	H	A	E	A	L	I	G	D	S	S	Q	V	L	Y	I	A	.	.	.	.	.	.	.	.	T	S	Q	I	L	D	D	E	M	A	A	R	I	E	H	H	R	Q	G	R	P	E	H	W	R	T	V	.	.	.	.	.	.	.	.	.	.
Query Conservation								.								.	.	.	.																		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Alig confidence								.								.	.	.	.																		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	L	F	I	S	A	T	N	T	N	A	G	K	T	T	C	A	R	L	L	A	Q	Y	C	N	A	C	G	V	K	T	I	L	L	K	P	I	E	T	G	V	N	D	A	I	N	H	S	S	D	A	H	L	F	L	Q	D	N	R	L	L	D	R	S	L	T	L	K	D	I	S	F	Y	R	Y	H	K	V	S	A
Template Known Secondary structure								S	S	T	T	S																T	T												S			T	T	T				S										T	T	T		T	T												S	S		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
															59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	W	Q	H	L	D	E	L	I	H	A	D	I	N	P	N	E	V	V	L	L	E	C	V	T	T	M	V	T	N	L	L	F	D	Y	G	G	D	K	D	P	D	E	W	D	Y	Q	A	M	E	Q	A	I	N	A	E	I	Q	S	L	I	A	A	C	Q	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	I	A	Q	Q	E	E	D	P	N	A	P	I	D	T	D	N	L	T	Q	R	L	H	N	F	T	K	T	Y	D	L	V	I	V	E	G	A	G	G	L	C	V	P	I	T	L	E	E	N	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	F	A	L	K
Template Known Secondary structure											T	T															G	G	G	T		S							S	S		T	T		B	S	S	S	S		B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																								.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	A	K	V	V	L	V	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	A	K	X	L	L	I	S	H
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions