Job Description P0AE76 Confidence 94.57% Date Thu Jan 5 11:22:43 GMT 2012 Rank 73 Aligned Residues 135 % Identity 18% Template c2ja1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from b. cereus with ttp bound as phosphate2 donor. Resolution 2.8 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		M	M	I	L	V	T	G	G	A	R	S	G	K	S	R	H	A	E	A	L	I	G	D	.	.	.	S	S	Q	V	L	Y	I	A	T	S	Q	I	L	D	D	E	M	A	A	R	I	E	H	H	R	Q	G	R	P	E	H	W	R	T	V	E	R	W	Q	H	L	D	E	L	I	H	A	D	I	N	P	N	E	V
Query Conservation																									.	.	.
Alig confidence																									.	.	.																																	.	.	.	.
Template Conservation																																																												.	.	.	.
Template Sequence		W	I	E	V	I	C	G	S	M	F	S	G	K	S	E	E	L	I	R	R	V	R	R	T	Q	F	A	K	Q	H	A	I	V	F	K	P	C	I	D	N	R	Y	S	E	E	D	V	V	S	H	N	G	L	K	V	K	A	V	.	.	.	.	P	V	S	A	S	K	D	I	F	E	H	I	T	E	E	L	D	V
Template Known Secondary structure									S	T	T	S	S															T	T									T	T			S	S		S	S					T	T	S							.	.	.	.			S	S	G	G	G	G	G	G	G			S	S
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	E	C	V	T	T	M	V	T	N	L	L	F	D	Y	G	G	D	K	D	P	D	E	W	D	Y	Q	A	M	E	Q	A	I	N	A	E	I	Q	S	L	I	A	A	C	Q	R	C	P	A	K	V	V	L	V	T	N	E	V	G	M	G	I	V	P	E	S	R	L	A	R	H	F	R	D	I	A	G	R
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Template Sequence		I	A	I	D	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	F	D	G	D	I	V	E	V	V	Q	V	L	A	N	R	G	Y	R	V	I	V	A	G	L	D	Q	D	F	R	G	L	P	F	G	Q	V	P	Q	L	M	A	.	.	.	.	.
Template Known Secondary structure					S	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S		T	T											T	T									S	B		T	T	S		B		S	S							.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90																											.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		V	N	Q	Q	L	A	A	A	A	N	E	V	W	L	V	.	.	.	.	.	V	S	G	I	G
Query Conservation																	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	I	A	E	H	V	T	K	L	Q	A	V	C	S	V	C	G	S	P
Template Known Secondary structure		.	.	.	.	.	.	.			S								B		T	T	T		S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions