Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE76
Confidence56.06%DateThu Jan 5 11:22:43 GMT 2012
Rank393Aligned Residues44
% Identity25%Templatec2gk7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: structural and functional insights into the human upf1 helicase core
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20. ........30.........40.....
Predicted Secondary structure 





.....










Query SS confidence 



















. . . . .























Query Sequence  MILVTGGARSGKSRHAEALI. . . . . GDSSQVLYIATSQILDDEMAARIE
Query Conservation 
 










  

 

.....       



    
 

  

 
Alig confidence 



















.....























Template Conservation    

 







 

   
          


 
 

 


 
   
 
Template Sequence  LSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIH
Template Known Secondary structure 

TTS
T
SS
SS
Template Predicted Secondary structure 













Template SS confidence 
















































   487..490.........500.........510.........520.........530.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions