Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE76
Confidence97.74%DateThu Jan 5 11:22:43 GMT 2012
Rank3Aligned Residues117
% Identity15%Templatec1xp8A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:reca protein; PDBTitle: "deinococcus radiodurans reca in complex with atp-gamma-s"
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20. ........30.........40.........50.........60.........70.
Predicted Secondary structure 






....



















.....
Query SS confidence 




















. . . .

















































. . . . .
Query Sequence  MMILVTGGARSGKSRHAEALI. . . . GDSSQVLYIATSQILDDEMAARIEHHRQGRPEHWRTVERWQHLDELIHAD. . . . .
Query Conservation 

 










  

 

....       



    
 

  

  

  
   
 
 
    
       .....
Alig confidence 




















....






















.....





















.....
Template Conservation   
 

 
  
 


 
 
         
  




 
          
.....
 
   
        
  
        
Template Sequence  RITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARAL. . . . . GVNTDELLVSQPDNGEQALEIMELLVR
Template Known Secondary structure  SSTTSSTT

SS



T.....T

GGG


SST
Template Predicted Secondary structure 
















.....






Template SS confidence 















































































   72.......80.........90.........100.........110......... 120.........130.........140......
 
   72.......80.........90.........100.........110.........120.........130....
Predicted Secondary structure 




















Query SS confidence 






























































Query Sequence  INPNEVVLLECVTTMVTNLLFDYGGDKDPDEWDYQAMEQAINAEIQSLIAACQRCPAKVVLVT
Query Conservation        






  
 
 
                        
  
   
       



Alig confidence 















............


































Template Conservation       






 

 ............   
     

     
  
   
      

 

Template Sequence  SGAIDVVVVDSVAALT. . . . . . . . . . . . PRAEIPGLQARLMSQALRKLTAILSKTGTAAIFIN
Template Known Secondary structure  TT

S
TTT

............
STT


TTT

Template Predicted Secondary structure 








............









Template SS confidence 






























































   147..150.........160.. .......170.........180.........190.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions