Job Description P0AE76 Confidence 96.57% Date Thu Jan 5 11:22:43 GMT 2012 Rank 22 Aligned Residues 127 % Identity 15% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																								.	.	.	.	.																														.	.	.	.	.	.	.	.												.	.	.	.	.
Query SS confidence																								.	.	.	.	.																														.	.	.	.	.	.	.	.												.	.	.	.	.
Query Sequence		M	I	L	V	T	G	G	A	R	S	G	K	S	R	H	A	E	A	L	I	G	D	.	.	.	.	.	S	S	Q	V	L	Y	I	A	T	S	Q	I	L	D	D	E	M	A	A	R	I	E	H	H	R	Q	G	R	P	.	.	.	.	.	.	.	.	E	H	W	R	T	V	E	R	W	Q	H	.	.	.	.	.
Query Conservation																								.	.	.	.	.																														.	.	.	.	.	.	.	.												.	.	.	.	.
Alig confidence																								.	.	.	.	.													.	.	.	.	.													.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		S	T	L	V	S	G	T	S	G	T	G	K	T	L	F	S	I	Q	F	L	Y	N	G	I	I	E	F	D	E	P	G	V	F	V	T	F	E	E	T	.	.	.	.	.	P	Q	D	I	I	K	N	A	R	S	F	G	W	D	L	A	K	L	V	D	E	G	K	L	F	I	L	D	A	S	P	D	P	E	G	Q
Template Known Secondary structure								S	T	T	S	S																									S	S	S		.	.	.	.	.									G	G	G	T									T	T	S										S	S
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
																64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	E	L	I	H	A	D	I	N	P	N	E	V	V	L	L	E	C	V	T	T	M	V	T	N	L	L	F	D	Y	G	G	D	K	D	P	D	E	W	D	Y	Q	A	M	E	Q	A	I	N	A	E	I	Q	S	L	I	A	A	C	Q	R	C	P	A	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	V	G	G	F	D	L	S	A	L	I	E	R	I	N	Y	A	I	Q	K	.	.	Y	R	A	R	R	V	S	I	D	S	V	T	S	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	Y	D	A	S	S	V	V	R	R	E	L	F	R	L	V	A	R	L	K	Q	I	G	A	T
Template Known Secondary structure		S			S	S																	.	.		T		S							S	T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T																					T
Template Predicted Secondary structure																							.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	L	V	T	N	E	V	G	M	G	I	V	P	E	S	R	L	A	R	H	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	M	T	T	E	R	I	E	E	Y	G	P	I	A	R	Y	G	V	E	E	F
Template Known Secondary structure									S	S	S	S	S		S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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