Job Description P0AE76 Confidence 72.90% Date Thu Jan 5 11:22:43 GMT 2012 Rank 289 Aligned Residues 89 % Identity 16% Template c1in8A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:holliday junction dna helicase ruvb; PDBTitle: thermotoga maritima ruvb t158v Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	V	T	G	G	A	R	S	G	K	S	R	H	A	E	A	L	I	G	D	S	S	Q	V	L	Y	I	A	T	S	Q	I	L	D	D	E	M	A	A	R	I	E	H	H	R	Q	G	R	P	E	H	W	R	T	V	E	R	W	Q	H	L	D	E	L	I	H	A	D	I	N	P	N	E	V	V	L	L	E	C
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	L	A	G	P	P	G	L	G	K	T	T	L	A	H	I	I	A	S	E	L	Q	T	N	I	H	V	T	S	G	P	V	L	V	K	Q	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	A	I	L	T	S	L	E	R	G	D	V	L	F	I	D	E
Template Known Secondary structure						S	S	T	T	S	S													T								T	T	T			S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T			T	T							T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																								.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	T	M	V	T	N	L	L	F	D	Y	G	G	D	K	D	P	D	E	W	D	Y	Q	A	M	E	Q	A	I	N	A	E	I	Q	S	L	I	A	A	C	Q	R	C	P	A	K	V	V	L	V	T	N	E
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	L	N	K	A	V	E	E	L	L	Y	S	A	I	E	D	F	Q	I	D	I	Q	P	F	T	L	V	G	A	T
Template Known Secondary structure		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G																S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		111																							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions