| Secondary structure and disorder prediction |   |
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1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
| Sequence |   |
M | E | K | K | L | G | L | S | A | L | T | A | L | V | L | S | S | M | L | G | A | G | V | F | S | L | P | Q | N | M | A | A | V | A | S | P | A | A | L | L | I | G | W | G | I | T | G | A | G | I | L | L | L | A | F | A | M | L | I | L |
| Secondary structure |   |
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| SS confidence |   |
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| Disorder |   |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
| Sequence |   |
T | R | I | R | P | E | L | D | G | G | I | F | T | Y | A | R | E | G | F | G | E | L | I | G | F | C | S | A | W | G | Y | W | L | C | A | V | I | A | N | V | S | Y | L | V | I | V | F | S | A | L | S | F | F | T | D | T | P | E | L | R |
| Secondary structure |   |
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| SS confidence |   |
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| Disorder |   |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
| Sequence |   |
L | F | G | D | G | N | T | W | Q | S | I | V | G | A | S | A | L | L | W | I | V | H | F | L | I | L | R | G | V | Q | T | A | A | S | I | N | L | V | A | T | L | A | K | L | L | P | L | G | L | F | V | V | L | A | M | M | M | F | K | L |
| Secondary structure |   |
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| SS confidence |   |
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| Disorder |   |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
| Sequence |   |
D | T | F | K | L | D | F | T | G | L | A | L | G | V | P | V | W | E | Q | V | K | N | T | M | L | I | T | L | W | V | F | I | G | V | E | G | A | V | V | V | S | A | R | A | R | N | K | R | D | V | G | K | A | T | L | L | A | V | L | S |
| Secondary structure |   |
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| SS confidence |   |
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| Disorder |   |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 |
| Sequence |   |
A | L | G | V | Y | L | L | V | T | L | L | S | L | G | V | V | A | R | P | E | L | A | E | I | R | N | P | S | M | A | G | L | M | V | E | M | M | G | P | W | G | E | I | I | I | A | A | G | L | I | V | S | V | C | G | A | Y | L | S | W |
| Secondary structure |   |
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| SS confidence |   |
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| Disorder |   |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 |
| Sequence |   |
T | I | M | A | A | E | V | P | F | L | A | A | T | H | K | A | F | P | R | I | F | A | R | Q | N | A | Q | A | A | P | S | A | S | L | W | L | T | N | I | C | V | Q | I | C | L | V | L | I | W | L | T | G | S | D | Y | N | T | L | L | T |
| Secondary structure |   |
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| SS confidence |   |
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| Disorder |   |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 |
| Sequence |   |
I | A | S | E | M | I | L | V | P | Y | F | L | V | G | A | F | L | L | K | I | A | T | R | P | L | H | K | A | V | G | V | G | A | C | I | Y | G | L | W | L | L | Y | A | S | G | P | M | H | L | L | L | S | V | V | L | Y | A | P | G | L |
| Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| SS confidence |   |
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| Disorder confidence |   |
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. | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 |
| Sequence |   |
L | V | F | L | Y | A | R | K | T | H | T | H | D | N | V | L | N | R | Q | E | M | V | L | I | G | M | L | L | I | A | S | V | P | A | T | W | M | L | V | G |
| Secondary structure |   |
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| SS confidence |   |
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| Disorder |   |
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| Disorder confidence |   |
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| Confidence Key |
| High(9) |   |
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Low (0) |
| ? | Disordered |
  | Alpha helix |
  | Beta strand |
Hover over an aligned region to see model and summary info
Please note, only up to the top 20 hits are modelled to reduce computer load
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| 1 |
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PDB 3gia chain A
Region: 2 - 437 Aligned: 416 Modelled: 416 Confidence: 100.0% Identity: 19% PDB header:transport protein Chain: A: PDB Molecule:uncharacterized protein mj0609;
PDBTitle: crystal structure of apct transporter
Phyre2
| 2 |
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PDB 3lrc chain C
Region: 2 - 434 Aligned: 400 Modelled: 400 Confidence: 100.0% Identity: 29% PDB header:transport protein Chain: C: PDB Molecule:arginine/agmatine antiporter;
PDBTitle: structure of e. coli adic (p1)
Phyre2
| 3 |
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PDB 2jln chain A
Region: 2 - 440 Aligned: 419 Modelled: 430 Confidence: 100.0% Identity: 12% PDB header:membrane protein Chain: A: PDB Molecule:mhp1;
PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter
Phyre2
| 4 |
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PDB 2xq2 chain A
Region: 3 - 460 Aligned: 442 Modelled: 458 Confidence: 99.4% Identity: 12% PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter;
PDBTitle: structure of the k294a mutant of vsglt
Phyre2
| 5 |
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PDB 3dh4 chain A
Region: 3 - 459 Aligned: 441 Modelled: 441 Confidence: 99.2% Identity: 10% PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter;
PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus
Phyre2
| 6 |
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PDB 2a65 chain A domain 1
Region: 6 - 457 Aligned: 442 Modelled: 442 Confidence: 97.5% Identity: 12% Fold: SNF-like Superfamily: SNF-like Family: SNF-like
Phyre2
| 7 |
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PDB 2w8a chain C
Region: 2 - 394 Aligned: 385 Modelled: 393 Confidence: 96.4% Identity: 12% PDB header:membrane protein Chain: C: PDB Molecule:glycine betaine transporter betp;
PDBTitle: crystal structure of the sodium-coupled glycine betaine2 symporter betp from corynebacterium glutamicum with bound3 substrate
Phyre2
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| Detailed template information |   |
| Binding site prediction |   |
Due to computational demand, binding site predictions are not run for batch jobs
If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite
| Transmembrane helix prediction |   |
Transmembrane helices have been predicted in your sequence to adopt the topology shown below

Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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| If you use the binding site
predictions from 3DLigandSite, please also cite: |
| 3DLigandSite: predicting ligand-binding sites using similar structures. |
| Wass MN, Kelley LA and Sternberg
MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed] |
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