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Job DescriptionP0AAE5
Confidence100.00%DateThu Jan 5 11:12:42 GMT 2012
Rank1Aligned Residues416
% Identity19%Templatec3giaA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:uncharacterized protein mj0609; PDBTitle: crystal structure of apct transporter
Resolution2.32 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  EKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGE
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Template Sequence  NKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNL. PETFILSGIYALLVAYSYTKLGAKIV. SNAGPIAFIHKAIGD
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B
TTTSGGG.TT

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TTT
S
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   5....10.........20.........30.........40. ........50.........60....... ..70.........80..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  . LIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVAT
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Template Sequence  NIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPI. . . . . . . NTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIV
Template Known Secondary structure  STT


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T
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   83......90.........100.........110.........120 .........130.........140.........150.....
 
   161........170.........180.........190.........200.........210.........220...... ...230.........
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Query Sequence  LAKLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARN. KRDVGKATLLAVL
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Template Sequence  LVKLLILGLFIFAGLITIHPSYV. . . . . IPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISIL
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GGGT.....S


SGGGGGTTTGGGBSS
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   156...160.........170........ .180.........190.........200.........210.........220.........230
 
   240.........250.........260.........270.........280.........290.........300.........310.........
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Query Sequence  SALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPR
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Template Sequence  IVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPE
Template Known Secondary structure  TTS
TGGGTTTSS

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   231........240.........250.........260.........270.........280.........290.........300.........310
 
   320.........330.........340.........350.........360.........370.........380.........390. .
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Query Sequence  IFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGV. . . . . . . G
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Template Sequence  FFERKVWFKSTEGLYITSALGVLFALLF. . . . . . NMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVL
Template Known Secondary structure  S

TTS

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   311........320.........330........ .340.........350.........360.........370.........380....
 
   393......400.........410.........420.........430.......
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Query Sequence  ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLN
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Template Sequence  GVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSN
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G
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   385....390.........400.........410.........420.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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